Gene Afer_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1944 
Symbol 
ID8324044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp2038556 
End bp2039116 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID644953071 
Productorotate phosphoribosyltransferase 
Protein accessionYP_003110521 
Protein GI256372697 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGACC ACCGTGCCGT CCTGATCGAT GCCCTCGAGA CCTACGGGAT CCTCCGAGGT 
AGCTTCACGC TCAAGTCCGG TGCCACCTCG ACCTGGTTCA TCGACACCAA GCGTGCGATC 
TGTCGACCGA TGGCACTCGC TGCGACCGCG GAACTCGCAC TCGAGGCACT CGATCCCACC 
GTCACCGCCA TCGGCGGCCT CACCATGGGT GCCGACCCGG TTGCCTTCGC GACCGCGACG 
CTCGCGCAGC TCCGGGGCCG CGCGCTGAAG GCCTTCAGCG TGCGCAAGGA GCCCAAAGCC 
TACGGCCAGG GAGGGGCCAT TGCGGGAGCG CTGGACCCCG ACGACGTCGT CTGTGTCGTC 
GAGGACACGC CGACGCGCGG CGTCTCGCTG CTCGCGGCGA TCGACGCGGT TCGCGAGGTC 
GGGGCCACCG TGTCCCAAGC CCTCGCGGTC GTCGATCGCG GAGGCACCGC CGCCGACGTC 
ATCGCCCCGA CTCCCTTCGT CGCGCTGGTC CGCGCCCCGG ACCTCGGCCT GCCCTACGAA 
GGCAGCGACA GAGCGTCTTG A
 
Protein sequence
MVDHRAVLID ALETYGILRG SFTLKSGATS TWFIDTKRAI CRPMALAATA ELALEALDPT 
VTAIGGLTMG ADPVAFATAT LAQLRGRALK AFSVRKEPKA YGQGGAIAGA LDPDDVVCVV 
EDTPTRGVSL LAAIDAVREV GATVSQALAV VDRGGTAADV IAPTPFVALV RAPDLGLPYE 
GSDRAS