Gene Afer_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1941 
Symbol 
ID8324039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2034719 
End bp2035588 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content70% 
IMG OID644953066 
ProductPHP domain protein 
Protein accessionYP_003110518 
Protein GI256372694 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC TCCACCTCCA CTCCACCGCC TCCGATGGCT CGAACGACCC TGCGGAACTC 
GCCGGGATCG TCGCCGGTGC CGAGATCGTC GCCCTCACCG ATCACGACAC CGTCGAGGGC
ATCGCCGCGT TTCGCGAGGC GCTCTCTGGC ACGAGCGCCT TCATCGTCGG GGCGGAGCTC
TCCCTCGCGA CGACCACGGG CTCGTTGCAC CTGCTGTGCT ACGGGACTGG ACTCCTCGGG
CCCGCTGGCA CGTCGCTCCT CGGCACGCTC GCCGACGATC GCACCCGTCG CAACGAGCAG
CTCCTCGCAC GTGCCGCAGC GAACGGACTC GACGTTCCTC TCGAAGCGGT GCTGGCTGCT
GCGGGAGCGA CCCGGCTCGA CGAGAAGAGC GTCGGGCGCC CGCACGTCGC AGCGGTACTC
GTCGAACGCG GCTACGCCCG CGACATCCCT GATGCGTTCG ATCGCTACCT CGCCAAGGGT
CGCCCTCTGT ACGTGCCGAA GGCACGCCTT CGCTTCGCCG ACGTGATCGA GCCGCTCGCT
GCGATCGGTG TGGCGACGGT CGTCGCCCAC CCGCTCAGCC TCGAGCTCGC GCCCGATGCA
CTCGAGGACC ACCTGCGCAC GCTCCGTGAC CTGGGTCTCG TCGGGCTCGA GGCGCACTAC
GCCGCCTACG CGCCCTCGAC CCGCACCGCC TTGGCCGAGC TCGCCGACCG CCTCCACCTC
GTCGCGACCG GCGGCTCGGA CGCCCATGGA CGCTTCAAGG CCGGCCTGTC CCCGCTGGTG
GGCTACGGCG ACCTCGATGT CCCGGTCGTA AGTGGCGAGG CACTCATCGA CGCCATCGCG
CGCCTCGGCG GCCATGCCGA CCTATACTGA
 
Protein sequence
MIDLHLHSTA SDGSNDPAEL AGIVAGAEIV ALTDHDTVEG IAAFREALSG TSAFIVGAEL 
SLATTTGSLH LLCYGTGLLG PAGTSLLGTL ADDRTRRNEQ LLARAAANGL DVPLEAVLAA
AGATRLDEKS VGRPHVAAVL VERGYARDIP DAFDRYLAKG RPLYVPKARL RFADVIEPLA
AIGVATVVAH PLSLELAPDA LEDHLRTLRD LGLVGLEAHY AAYAPSTRTA LAELADRLHL
VATGGSDAHG RFKAGLSPLV GYGDLDVPVV SGEALIDAIA RLGGHADLY