| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1931 |
|---|
| Symbol | |
|---|
| ID | 8324028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 2021012 |
|---|
| End bp | 2022070 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644953055 |
|---|
| Product | transcriptional regulator of molybdate metabolism, XRE family |
|---|
| Protein accession | YP_003110508 |
|---|
| Protein GI | 256372684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.584244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA TCGCACGGCG GCTGCGTCGC GTGCGGGGGC TTTCGCAGCA GCAGGTGGCC
GACGCACTCG GCATCTCCCG CCAGGCGGTC GCGGGAATCG AGTCAGGAGC CTTCGAACCG
TCGCTCCCGG TGGCGATGGC GCTCGCACGC TTCTTCGGCG TGAGCGTGGA GGAACTCTTC
GACACGAGCG GTGCTGGGCG CGAGGAGGCG ATCGAGCTCG TCGGCCCAGC CGCGGTCGGA
GAGCGGATCG AGGTCGCGCG GGTCGCCGAT CGACTCGTCG GGGTTCCGCG CGGGGGTGAG
CACGGCATCG TGCCGGGATT TCATCCCGCT GGAGCTCGGC TGCTCGGCCC TCGTCGGGCC
ACGGTGACGA GGCGCCCTGC GCCTGCGGTC GTGGTTGCGG GGTGCGATCC GGCGCTGTTG
CTGCTCGCAG GTCCTCTCGC GCACCGCCCT CGGCCGGTCG AGCTCGTCTG GTGGCCGGCG
CCCTCCGAAG CCGCGCTGCG AGCGCTCGCG GACGGTCTCG TGCACGCAGC GGGCTTCCAC
GTGGCGACCG ATCCATCGGG TCGGGTCTCC TTGCCGCCCC TGCCGCCCGG TATCGAGGTG
CGATCGTTTG CGGCCTGGCG CGAGGGGCTG GTGTCGCGCG CTCGAGACGC GACTCGTCCC
CTCGAACTCG TGCAGGGACG GCTCGCGAAC CGCCAGCCTG GTTCTGAGGC GCGCGCCCTC
CTCGCTGACT GGCTTGCATC CGAGGGCATC GTGCCCGAGC GCGTCCCTGG TTGGGACACC
GAGGTCGATT CTCACCTCAT GGTGGCCGAA GCGGTCGCGA CCGGAGTCGC GACCACGGGC
GTCGTCCTCG AGCCCGCGGC GCGGGAGTTC GGACTCTACT TTGCGCCGCT CGCAGACGAG
CGCTTCTTCC TCGCCGTGAG CCGCGAGGTG GCACCGAGCG ATGAGGAGGT GCGTCGAGCG
CTCGATGCCG CCCTTGCGAG CGACGAACTG CATCGCGAAC TCGCAGCGCT GCCGGGCTAT
CGGGGCATCG ACGACCTCGG TTCGGTGGTC GATCCCTGA
|
|---|
| Protein sequence | MSEIARRLRR VRGLSQQQVA DALGISRQAV AGIESGAFEP SLPVAMALAR FFGVSVEELF
DTSGAGREEA IELVGPAAVG ERIEVARVAD RLVGVPRGGE HGIVPGFHPA GARLLGPRRA
TVTRRPAPAV VVAGCDPALL LLAGPLAHRP RPVELVWWPA PSEAALRALA DGLVHAAGFH
VATDPSGRVS LPPLPPGIEV RSFAAWREGL VSRARDATRP LELVQGRLAN RQPGSEARAL
LADWLASEGI VPERVPGWDT EVDSHLMVAE AVATGVATTG VVLEPAAREF GLYFAPLADE
RFFLAVSREV APSDEEVRRA LDAALASDEL HRELAALPGY RGIDDLGSVV DP
|
|---|
| |