Gene Afer_1924 details

Gene Information

• Locus tag: Afer_1924
• ID: 8324021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: +
• Start bp: 2011944
• End bp: 2012639
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644953048
• Product: TrkA-N domain protein
• Protein accession: YP_003110501
• Protein GI: 256372677
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGATCG CGATCGTCGG CGGCGGCAAC GTCGGGCGCT TCCTCGCTGC GGACCTCCAG 
CACCACCACG ACGTCGTCCT GTTCGAACGA GATCACGAGC TGGCGGCACA CCTTGCTTCC 
CAGCTTCGCT GCACCGTCGT CTTCGGAGAC GGCTGCGAGC TGTCCACGCT GGCGGACGCG 
GGCGTTGGCA CCTGCGACGT CGTCGTGGCC TCGACCGGCG ACGACGAGGA CAACCTCGTC 
GTCTCCCTGC TCGCCAAGCA GGAATTTGCT GTTCCGCGGG TCATCGCACG CGTGAACCAC 
CCGAAGAACC ATTGGCTGTT CAACCGATCC TGGGGCGTCG ACGTGGCCGT CTCGACCCCG 
CATCTCATCA GCGCGCTCGT CGAAGAAGCG GTCAGCGTCG GTTCGCTCGT CCAGCTGCTC 
GCGTTCGACA ACTCGGGCGC GCGCCTCGTG GAGGTCACGC TCACGGCAAC GTCTCCAGCG 
GTCCAACGGA CGATCGCGAC CCTCGGGCTC CCTCGAGACG CCTCGGTGGT CGCCGTGGTG 
CGGGGAGAGA ACGTGATCGT CCCTCGGGGT GAGGTGACCC TCAAGCCCGA GGATCACGTG 
CTCTGCCTCG TCGTCGGCGA GACTGAGGCG GCGGTGCGCA GCGTTCTCAT CGGCGACGAG 
GACACGATCG CCGAGGCCGA CGCGGCCACG CCCTGA 

 

Protein sequence

MRIAIVGGGN VGRFLAADLQ HHHDVVLFER DHELAAHLAS QLRCTVVFGD GCELSTLADA 
GVGTCDVVVA STGDDEDNLV VSLLAKQEFA VPRVIARVNH PKNHWLFNRS WGVDVAVSTP 
HLISALVEEA VSVGSLVQLL AFDNSGARLV EVTLTATSPA VQRTIATLGL PRDASVVAVV 
RGENVIVPRG EVTLKPEDHV LCLVVGETEA AVRSVLIGDE DTIAEADAAT P