| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1921 |
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| Symbol | |
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| ID | 8324018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2006202 |
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| End bp | 2008754 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953045 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003110498 |
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| Protein GI | 256372674 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAAAGC CACTCGTGAT CGTGGAGTCG CCCACCAAGG CTCGGACGAT CCGGCGCTAC
CTCGGCGACG AGTGGGTCGT CGAGGCGTCC GTCGGCCACG TGCGAGATCT GCCGCGCTCG
GCGAAGGAGA TCCCGCAAGC GGTGAAGAAG GAGCCGTGGG CGCGTCTCGG TGTCGATACC
GAGCACGGGT TCCGGCCGCT CTACGTGATC CCTCCGGAGA AGCGCGAGCA GGTCAAGCGC
CTCAAGGCCC TGCTCGCCGA CGCCAGCGAG CTCTTCCTCG CGACCGATGA GGATCGCGAA
GGAGAATCCA TCGCCTGGCA CCTGCTCGAG GTGCTCGCCC CTCGCGTTCC TGTTCGTCGC
ATGGTGTTCC ACGAGATCAC GGAGCGAGCG ATCCGCGAGG CCGTCGGGGC GACACGGGGG
ATCGACCGCG GCCTCGTCGA TGCCCAGGAG ACACGGCGCG TGCTCGACCG GCTCTTCGGC
TACGAGGTCT CGCCGGTGCT GTGGAAGAAG GTGATGCCGC GACTGTCGGC CGGTCGCGTC
CAGTCGGTGG CCTGTCGGCT CCTCGTCGAG CGCGAGCGCG AGCGGATGGC GTTTCGTCGA
GCGAGCTACT TCGACGTCGT CGCCGAGTTC TCGCGTGCCG AGGCCCCCGC GCCCTTCGCC
GCGCGCCTGG TCGCCCTCGA CGAGGCGCGT ATCGCCACCG GCCGCGACTT CGACGCGACC
GGTCGCGTCG CCACGGGCGT CGTGGTCCTC GACGGCGCGC ACGCGCTCGC GGTCGCAGAA
GCGGTCGAGG GTCGAGGTGG CGTGGTACGC GAGCTCACCG AGCGGCCGTT CACGCGACGA
CCGGACGCGC CGTTCATGAC CTCGACGCTG CAGCAGGAGG CCTCGCGAAA ACTGCGCTTC
TCCGCGCAGC GCACCATGGC CGTGGCCCAG CGGCTTTATG AGCAGGGCTT CATCACCTAC
ATGCGAACCG ACTCCGTCCA GCTTGCCGGA GAGGCGCTCG CAGAAGCCCG TCGACTCATC
GCCGAGCGCT TCCCGGGAGC ACTCCCCGAC GCGCCGCGTC AGTATCGCTC GCGTGTGAAG
AACGCGCAGG AGGCCCACGA AGCCATCCGC CCAGCGGGTA CCCGTTGGCG CTCGCCGGAC
GAGGTGGCAA GGGAGGCTCC CGGCGACGAG GCGCGCCTCT ACGAGCTGAT CTGGCGTCGC
ACGCTGGCCT CCCAGATGAC CGACGCCCGC GGGATGTCCG CCGTCGCGAC GATCGACGTC
GCGCTCGGGC CCGAGGTTCG CATCGACGGT CGCGAGATCG AGCGGGCGAC GTTCGTCGCT
CGTGGCCGCA CGCTCACCGA TCCAGGGTTC CTCGCGGTCT ACCCGGAGCA ACTCAGCGAG
GACGACGAGG TCGACCTGCC GCCTCTGGCC GCTGGTGTCG CGCTCACCAC GACGGGTGCC
CAGCCCCAGG GGCACGAGAC GCAGCCTCCG GCGCGCTATA CGGAGGCATC GCTCGTGCGC
GCGCTCGAGG AGCGTGGCAT CGGACGGCCG TCGACCTATG CGCAGATCAT CAGCACGCTC
GTCGAGCGCT CGTATGCATG GCGACGCTCG CAAGCGCTGA TTCCGACCTT TCTCGGCTTC
GCGGTGGTGC AGCTGCTCGA GCGCCACTTC GCCGAGCTGG TGGACTACTC CTTCACGGCG
CGTCTCGAGG ACGACCTCGA CCGCATCGCG ATCGGCGAGG AGGAGCCCAC GCCCTACCTC
GCGCATTTCT ACTGGGGCAA CGGTGCCCCC GGTCTCCATC AGCTCGTCAC CGAGCGACTG
GGGGAGATCG ACGCACGCGA CGTGAACTCG ATCCCGATCG GCCAGCGCGC GGATGGAACG
CCGGTCGTGG TGCGTGTCGG CCGCTACGGA CCGTTCCTCC AGGCAGGCGA GGAGACCGCC
TCCATCCCAG AGGACCTCCC TCCCGACGAG CTCACCCTCG AGCGGGCCGA GGAGCTGCTC
GAGCGGGGCA GGCTCGGCGA TCGTGTGCTC GGCGAACTCG ACGGGCAACC CGTGCTCCTG
CGTACCGGCC GGTTCGGTCC CTATGTGCAG CTCGGCGAGG GCGACGATCG CTCGCTGCGG
CGTGCATCGC TGCTGCCAGG GCAGCGGGTC GAGACCCTGA GCTACGAGGA CGCGGTCGCG
CTCTTGTCCT TGCCGCGGTT GGTCGGGGTC GACCCCGAGT CCCAGCAGGA GATCTGGGCG
CACAACGGCC GCTTCGGTCC GTATCTCGCC AAGGGTCGCG ACACCCGCTC GCTCGACAAG
CCCGAGCAGC TCTTCACCAT CGATCTCACC GAAGCGCTCG CGCGCTTTCG CGAGCCCAAG
CGGCGCGGTC GCTCGGCCAG CGTGCTCGAG TTGGGCACCC ATCCGGACAC CGGCGCGCGC
GTCGTGGTCC GTTCGGGTCG CTACGGCCCC TACGTCTCCG ACGGCGAGGT GAACGCCTCC
TTGCCGCGAG GCGTCGATCC GGCCAGCTTG GATCTCGACA CGGCGGTGGA GCTCTTGGCC
GAGCGGCGTG CGCGCTTGGG ATCTGGCTCG TGA
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| Protein sequence | MPKPLVIVES PTKARTIRRY LGDEWVVEAS VGHVRDLPRS AKEIPQAVKK EPWARLGVDT
EHGFRPLYVI PPEKREQVKR LKALLADASE LFLATDEDRE GESIAWHLLE VLAPRVPVRR
MVFHEITERA IREAVGATRG IDRGLVDAQE TRRVLDRLFG YEVSPVLWKK VMPRLSAGRV
QSVACRLLVE RERERMAFRR ASYFDVVAEF SRAEAPAPFA ARLVALDEAR IATGRDFDAT
GRVATGVVVL DGAHALAVAE AVEGRGGVVR ELTERPFTRR PDAPFMTSTL QQEASRKLRF
SAQRTMAVAQ RLYEQGFITY MRTDSVQLAG EALAEARRLI AERFPGALPD APRQYRSRVK
NAQEAHEAIR PAGTRWRSPD EVAREAPGDE ARLYELIWRR TLASQMTDAR GMSAVATIDV
ALGPEVRIDG REIERATFVA RGRTLTDPGF LAVYPEQLSE DDEVDLPPLA AGVALTTTGA
QPQGHETQPP ARYTEASLVR ALEERGIGRP STYAQIISTL VERSYAWRRS QALIPTFLGF
AVVQLLERHF AELVDYSFTA RLEDDLDRIA IGEEEPTPYL AHFYWGNGAP GLHQLVTERL
GEIDARDVNS IPIGQRADGT PVVVRVGRYG PFLQAGEETA SIPEDLPPDE LTLERAEELL
ERGRLGDRVL GELDGQPVLL RTGRFGPYVQ LGEGDDRSLR RASLLPGQRV ETLSYEDAVA
LLSLPRLVGV DPESQQEIWA HNGRFGPYLA KGRDTRSLDK PEQLFTIDLT EALARFREPK
RRGRSASVLE LGTHPDTGAR VVVRSGRYGP YVSDGEVNAS LPRGVDPASL DLDTAVELLA
ERRARLGSGS
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