| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1918 |
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| Symbol | |
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| ID | 8324014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2004063 |
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| End bp | 2004638 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953042 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003110496 |
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| Protein GI | 256372672 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02947] RNA polymerase sigma-70 factor, TIGR02947 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCGGATC AGGCGCGCTT CGAAGAGCTT GCCCTGCCGT ACGCCGACAA CCTCTACTCC
GCGGCGATGC GTATGACCCA CAACGCGGCC GACGCCGAGG ACTTGGTGCA AGAGACGTTC
CTGAAGGCTT ATCGTGCCTT CGGTACCTTC GAGGAGGGCA CCAACCTCAA GGCGTGGCTC
TATCGCATCC TCACCAACAC CTACATCAAT GCCTACCGAG CTCGTCGCCG TCGCCCGGAC
GAGACGGACC TCGACGAGGT CGAGCAGCTC TACCTCTATC GCCGCCTGGG CGGTCTCGAG
GCAGCCCTCG CGGGCCGGAG CGCCGAGGAG GAGGTCCTCG ACACCTTCAC CGATGCCGAC
GTCAAGGCGG CGCTCGAGGC CCTGCCAGAG CAGTTCCGCT TGGCCGTGAT CCTGGCGGAC
GTCGAAGGTT TTAGCTACCG TGAGATCGCC GACATCATGG ACGTCCCGCT CGGAACCGTG
ATGAGTCGGC TGCATCGGGG AAGGCGCGCG CTCCAGCGCG CGTTGATCGA GAAGCGACTG
GCTCGTGCGG AGCGGGCAGC GGAGACCGAG GCGTAG
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| Protein sequence | MADQARFEEL ALPYADNLYS AAMRMTHNAA DAEDLVQETF LKAYRAFGTF EEGTNLKAWL
YRILTNTYIN AYRARRRRPD ETDLDEVEQL YLYRRLGGLE AALAGRSAEE EVLDTFTDAD
VKAALEALPE QFRLAVILAD VEGFSYREIA DIMDVPLGTV MSRLHRGRRA LQRALIEKRL
ARAERAAETE A
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