Gene Afer_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1913 
Symbol 
ID8324009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2001054 
End bp2001599 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID644953037 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_003110491 
Protein GI256372667 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTGGT CGCTGGATGA CCCGCACATC GGCGATGTCC TGATCAGTGA GGCAGACCTC 
CGTGCGCGCG TCGGCGAGCT CGGAGCGGCG ATCACCAAGG ACTACGCGGG CCGCGCACCG
TTCCTCGTGG GGGTGCTCAA GGGTGCGTTC GTGTTCATGG GAGACCTGGC ACGAGCGATC
GAGCTGCCGG TCGCGGTGGA CTTCATGGCG GTGTCCTCCT ATGGCAGTGC CACGCGGACC
TCGGGTGTCG TGCGGATCAT CAAGGACCTC GACGTCGAGC TCGAAGGGCG CGACGTCATC
GTGGTCGAAG ACATCGTCGA GAGCGGCCTC ACGCTCCGCT ACCTCTTGAC GAACCTCGCC
TCGCGCAACC CGGCGTCGCT CGCCGTGTGC GCCCTGTTGC GCAAGCCTGA CGACGGTCGA
GGCGATCTGC CCATCGCCTA CGTCGGCTTC GACATCCCGC CCGCCTTCGT CATCGGCTAT
GGACTCGACG TCGCCGAGCG CTACCGGAAC CTCCCGTTCA TCGCGACCTA TCGGGAGGAC
GTATGA
 
Protein sequence
MTWSLDDPHI GDVLISEADL RARVGELGAA ITKDYAGRAP FLVGVLKGAF VFMGDLARAI 
ELPVAVDFMA VSSYGSATRT SGVVRIIKDL DVELEGRDVI VVEDIVESGL TLRYLLTNLA
SRNPASLAVC ALLRKPDDGR GDLPIAYVGF DIPPAFVIGY GLDVAERYRN LPFIATYRED
V