| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1909 |
|---|
| Symbol | |
|---|
| ID | 8324005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1998832 |
|---|
| End bp | 1999317 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644953033 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridin epyrophosphokinase |
|---|
| Protein accession | YP_003110487 |
|---|
| Protein GI | 256372663 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCGCC GCGCTTTCGT TGCCCTCGGC GCCAACCTCG GCGACCGAGC GCGGACCCTC
GATGCGGCGC TCGGCGCCAT CGGCGAGGTC GTCGCGGTGT CGAACCTCTA CGAGACCGAG
CCGGTCGGCG GGCCGGGGGC GCAACCGCGG TACCTGAACG CGGTGTGCGA GCTGCGCACG
GACCGTTCGC CGTTTCGCCT GCTCGACGAC TTGCTCGCGC TCGAAGCGCG CCACGGTCGC
CAACGCAGCG TCCCGAACGC TCCTCGGACG CTCGATCTCG ACGTGGTGTG GATGGACGGC
GTCGTCGTGA GCTCGCCTCC GCGCCTCGTC GTCCCCCATC CGCGCGCGTT CGGTCGGTCG
TTCGTGCTGT GGCCGCTCGC GGACCTCGAC GCCGCCCTCG CGCGGTCGTT GGCGGGGGGA
TCGTTGGCCC ACCTCGAGCG ACCGCCCGTC GTCGCTCATG CCGCGGGGTG CGCGTGGACC
CGCTGA
|
|---|
| Protein sequence | MRRRAFVALG ANLGDRARTL DAALGAIGEV VAVSNLYETE PVGGPGAQPR YLNAVCELRT
DRSPFRLLDD LLALEARHGR QRSVPNAPRT LDLDVVWMDG VVVSSPPRLV VPHPRAFGRS
FVLWPLADLD AALARSLAGG SLAHLERPPV VAHAAGCAWT R
|
|---|
| |