Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1907 |
Symbol | |
ID | 8324003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1997194 |
End bp | 1998006 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953031 |
Product | putative transcriptional acitvator, Baf family |
Protein accession | YP_003110485 |
Protein GI | 256372661 |
COG category | [K] Transcription |
COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGC ACGTGGTCAC GATCGACGTC GGCAACACCG AGACCGTGAT CGGCGTCTAC GACACCGAGG CTGCGGCGAC GACGGCCGAG GAGGGACTCG TCGCGCACCT TCGGCTGGCG ACGCGCGCCG ATCGCACGGC AGACGAGACC GCCATCCTCG TCGAGACCTT TCTCGATCGC CACCACCTCG TCGGTGGGCT CGTCGGCGCG ATCGTTGCAT CCTCGGCGGC GAACGTGACC CGAAGCGTCG TGGACATGGT CGAGGGGCAT CTCGGGCTTC GTCCGCTCGT GGTCGGACCG GGGACGCGGG TCGGGATCCC GATCCGCTAC GACGATCCAC GAGAGGTCGG TCCCGATCGC GTGGTCGATG CGGTGGCCGC GGTCGAGCTC TATGGCGCGC CGGTGCTGGT GGTCGACTTC GGCACCGCGA CCACCGTCGA TGCGATCGAT GCGAGCGGTG CCTACCTCGG CGGTGCGATC GCGCCGGGGG TGGTCGTCGC GCTCGATGCG TTGGTGGCGC GTGCTGCGGC GCTGCGCAAG GTCGAGCTAC GGCGGCCGAA GGCGGCGATC GGTCGTTCGA CGGTGGAGTC GATCCAGTCC GGGGTGATCA ACGGTGTCGT CGGGCAGGTC ACCCACCTCG TGGAGCTCAT GCGTGCCGAG ATCGGAGCCG AGGCTCCGGT CGTCGCGACG GGCGGGCTGT GCGAGGTCAT CGGCTGCGAG GTGCCCGTCG TCGGGCATAT CGAGCCGTGG CTGACGCTCC ACGGGCTGCG GCTCGTCTGG GCGCGCAACC AGGGACGGCG GGCTCGAGCC TAG
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Protein sequence | MAEHVVTIDV GNTETVIGVY DTEAAATTAE EGLVAHLRLA TRADRTADET AILVETFLDR HHLVGGLVGA IVASSAANVT RSVVDMVEGH LGLRPLVVGP GTRVGIPIRY DDPREVGPDR VVDAVAAVEL YGAPVLVVDF GTATTVDAID ASGAYLGGAI APGVVVALDA LVARAAALRK VELRRPKAAI GRSTVESIQS GVINGVVGQV THLVELMRAE IGAEAPVVAT GGLCEVIGCE VPVVGHIEPW LTLHGLRLVW ARNQGRRARA
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