| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1900 |
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| Symbol | |
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| ID | 8323996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1986863 |
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| End bp | 1987957 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644953024 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003110478 |
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| Protein GI | 256372654 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.353019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGTCG CCACCCTCGT CGTCGCGGCG GGGCAAGGGA GTCGTTTCGG TGGCCCGAAG
CAGTTCGAGG CGCTCGGCAA TCGATCGCTG GTCGAGCATG CGGTCGAGGC CGCGCGCGCG
GTGTCGTCGC AGGTGATCGT GGCGCTCCCG CCGGAGGTCG ATCGGGTCGT CGAAGGGGCG
ACGACGGTTG TCGGCGGGAG GACGAGGTCT GAGTCGGTCC GCCGGGCCTT TGCGGCCCTC
GAGGGCGCGC CGGAGTTCGT CCTGGTGCAC GACGCGGCAC GCCCGTTGGC ACCGGTGTCG
CTGTTCGAGA GGGTCATCGC CCGTCTTGCG AACGGTGCAG CGGTCGTCGT CCCGGCCCTT
CCCGTTGCGG ACACGATCAA GGAGGTGCGC GACGGTCGGG TGACCCGCAC GCTCGAGCGA
GCCCACCTCC GCGCGATCCA GACACCGCAG GGCTTCCACT ACGGCGTGCT GGCTGGGGTG
ATCGGCTCAG GGCTGGAGGG CACCGACGAC GCGGTCGTCG CCGAGCAGCT GGGCTGGACC
GTGGAGGTGG TCGACGGGTC CCCGTCTGCG CGCAAGGTCA CGACGCGACG CGACCTGCGA
GATCTCATCG GTGTGCGCGT CGGGTTGGGG CTCGACCAGC ATCCGCGCTC CGACGAACCC
GGACGGCCGT TGGTGCTCGG CGGGGTGACG GTGCCTGGGC CTGGCCTGCG GGCACACTCC
GACGGGGACG CACTCTGTCA CGCGGTGGCA GATGCGATGC TCGGCGCCGC TGGGATCGGT
GGCATCGGCG ACCTCTATGC CGACACCGAC CCGGCCTTTC GCGGAGCCGA CTCCTTGGAG
CTGCTCGCGG GCTGTGTTCG GCTCGTGCGG GGTCGAGGTC TTCGGGTCGT GCAGGTCGAC
GCGACCATCG TGTGCGAGAC ACCGAAGCTC TCGCCGTATC TCGCCCGGAT GGCCCGCACG
ATCGAGGGTG TCGTCGCGGC GCCAGCGCTC GTCAAGGCCA AGCATCCGGA AGGCATCGGT
GCGCTCGGTC GTGGCGAGGG CGTCGCTGCG CTCGCGGTCG TGCTGCTCGA AGGCGTGGTC
GATGCCGAGG ACTGA
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| Protein sequence | MAVATLVVAA GQGSRFGGPK QFEALGNRSL VEHAVEAARA VSSQVIVALP PEVDRVVEGA
TTVVGGRTRS ESVRRAFAAL EGAPEFVLVH DAARPLAPVS LFERVIARLA NGAAVVVPAL
PVADTIKEVR DGRVTRTLER AHLRAIQTPQ GFHYGVLAGV IGSGLEGTDD AVVAEQLGWT
VEVVDGSPSA RKVTTRRDLR DLIGVRVGLG LDQHPRSDEP GRPLVLGGVT VPGPGLRAHS
DGDALCHAVA DAMLGAAGIG GIGDLYADTD PAFRGADSLE LLAGCVRLVR GRGLRVVQVD
ATIVCETPKL SPYLARMART IEGVVAAPAL VKAKHPEGIG ALGRGEGVAA LAVVLLEGVV
DAED
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