| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1881 |
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| Symbol | |
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| ID | 8323977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1967432 |
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| End bp | 1968655 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953011 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_003110465 |
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| Protein GI | 256372641 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.328566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAACTC CGGTGCGCAT GGGAGCCGAC GGTCGGCTGA TCGTCGGCGA TGAGGTCATC
ATCCCCTACA TCGAGGGCGA TGGAACCGGG GTGGACATCT GGCCCGCCGC GAGGACGGTC
TTCGATGCGG CACTCGCGGC CCATGGGCGT CGCGTCGAGT GGCGCGAGGT GCTCGCTGGC
GAGAAGGCCT TCCGCGAGAC CGGGTCGTGG CTGCCGGACG AGACGCTGTC GGTGTTTCGT
GAGTATCTCG TCGGGATCAA GGGCCCGCTC ACGACCCCGG TCGGTGGCGG CATCCGTTCG
CTGAACGTCG CCCTGCGTCA GCTGCTCGAT CTCTACGTCT GCCTGCGGCC CGTGCGCTGG
TTCGAGGGCG TGCCGTCGCC GGTGCGCCAT CCGGAGTGGG TGGACATGGT GATCTTTCGC
GAGAACACCG AGGACGTCTA CGCTGGCCTC GAGGTCCAGG CTGGTTCGGA GGAGGCCCGT
GCGCTGCGCG AGTTCCTCGC CGAGCGCTTC GGGTGGGAGC TCGGCGCCGA TGCAGGGATC
GGGATCAAGC CCGTGTCGGC CCATGGGTCC AAGCGGCTCA TCCGAGCTGC CATTCGCTAC
GCCCTCGATC ACCACCGCCG CTCGGTGACG CTCGTCCACA AGGGCAACAT CCAGAAGTTC
ACCGAGGGTG CGTTCCGTGC GTGGGGGTAC GAGCTCGTGC GTGAGGAGTT CGCGGACGTC
GCCGTTGGCT GGGACGACTG TGGTGGTGAT CCCGGCGACA AGCTGCTCGT CAAGGATGCG
ATCGCCGACA ACGCCTTCCA GCAGGTGCTC ACGCGGCCTC GGGACTACGA CGTCATCGCG
ACGACGAACC TGAACGGCGA TTACCTCTCG GACGCGCTGG CCGCCCAGGT CGGAGGCATC
GGCATCGCAC CGGGCGGCAA CATCAACTAC GTCACCGGTC ACGGGATCTT CGAGGCGACC
CATGGTACGG CCCCGAAGTA TGCCGGCAAG GACATGGTGA ATCCGGGTTC GGTCATCCTG
TCCGGCGTGC TGATGTTCGA GTACCTGGGC TGGAATGACG TCGCCGACGC CATCGTCGAT
GCGCTCGAGC GGACCATCGC CGAGGGCATC GTGACCTACG ACTTCGCACG GTTGCGCGAT
GGCGCGACCA AGGTCTCGAC CAGCGAGTTC GGCCACGCCG TCGCGGAGCG CATTCGTCGG
GGGGACGAGA AGACGGGGGG ATGA
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| Protein sequence | MATPVRMGAD GRLIVGDEVI IPYIEGDGTG VDIWPAARTV FDAALAAHGR RVEWREVLAG
EKAFRETGSW LPDETLSVFR EYLVGIKGPL TTPVGGGIRS LNVALRQLLD LYVCLRPVRW
FEGVPSPVRH PEWVDMVIFR ENTEDVYAGL EVQAGSEEAR ALREFLAERF GWELGADAGI
GIKPVSAHGS KRLIRAAIRY ALDHHRRSVT LVHKGNIQKF TEGAFRAWGY ELVREEFADV
AVGWDDCGGD PGDKLLVKDA IADNAFQQVL TRPRDYDVIA TTNLNGDYLS DALAAQVGGI
GIAPGGNINY VTGHGIFEAT HGTAPKYAGK DMVNPGSVIL SGVLMFEYLG WNDVADAIVD
ALERTIAEGI VTYDFARLRD GATKVSTSEF GHAVAERIRR GDEKTGG
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