Gene Afer_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1879 
Symbol 
ID8323975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1965439 
End bp1966389 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID644953009 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003110463 
Protein GI256372639 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAC TCGCCATCGA GGCGCACGAC CTCACGAAGC GCTTCGGCGA TCTCGTCGCG 
CTCGCCGGCG TCAGCTTGAG CGTCGCCCAC GGCGAGGTGT TCGGTCTCCT CGGACCCAAC 
GGTGCGGGCA AGACGACGCT GGTACGCATC CTCACGACGG TGCTCGTCCC CGACGGCGGA 
CGTGCCATCG TCGCGGGCGC CGATCTCATT GGCGAGCCGG ACGTCGTTCG TCGCCGCATC 
GGGCTTGCTG GCCAGTTCGC TGCGGTCGAC CCACGCCTGA GCGCTCGTGA GAATCTCGAG 
ATGGTCGGTC GGCTCTGCCA CCTCGGTCGG CGTCGAGCCA GGGAGCGTGC GGGGTCGCTG 
CTCGAGGCCT TCGGTCTCGC AGGGGCCGCA GACCGCCCCC TGCGGACCTA CTCGGGCGGC 
ATGCGCCGTC GGCTCGACCT TGCCGCAGCA CTGGTCGCTG AGCCGCCGGT GCTGTTCCTC 
GACGAGCCCA CGACCGGCCT CGACCCGGAG AGTCGCCTCG CGCTCTGGGC GATCGTGGCG 
GATCTCGCAG CGAGCGGGAC CACCGTGCTG CTCACCACGC AGTACCTGGA GGAGGCCGAT 
CGACTGGCGG AGCGACTCGT CATCGTCGAC CACGGCCGCA TCGTGGCCGA GGGAACGCCA 
GCCTCCCTGA AGGCTCGCCT CGGGGCGACG GTGGTCGAGG TGCGGCTCGC CGCGGAGCCG 
CCGCCCATGG TCGTCGAGGC GCTGCGGGCG GCCGGGTTTC CCGATCCGCG CGTCGATGGC 
CGCGTGGTCG AGCTCGGCGT CGAGAACGGT GCGCAGGCAG CGATGATCGC GCTGCGTGCG 
CTCGACGGCG CCGGGGTCGC GATCGAGGGC ATGGTGATAC GCGAACCAAC GCTCGACGAC 
GTGTTTCTCG CGATCACCAA CGGGCAGCTG AGTACCGAGG GGGCGGCATG A
 
Protein sequence
MEPLAIEAHD LTKRFGDLVA LAGVSLSVAH GEVFGLLGPN GAGKTTLVRI LTTVLVPDGG 
RAIVAGADLI GEPDVVRRRI GLAGQFAAVD PRLSARENLE MVGRLCHLGR RRARERAGSL 
LEAFGLAGAA DRPLRTYSGG MRRRLDLAAA LVAEPPVLFL DEPTTGLDPE SRLALWAIVA 
DLAASGTTVL LTTQYLEEAD RLAERLVIVD HGRIVAEGTP ASLKARLGAT VVEVRLAAEP 
PPMVVEALRA AGFPDPRVDG RVVELGVENG AQAAMIALRA LDGAGVAIEG MVIREPTLDD 
VFLAITNGQL STEGAA