| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1859 |
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| Symbol | |
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| ID | 8323954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1945777 |
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| End bp | 1947426 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952991 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003110446 |
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| Protein GI | 256372622 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA TTCCTGTCGC GTCATTGCGG CGCCGTCACG TCGACGAAGC GCCAACCGAT
CACGTCGTAC AAGCTGCACA CCCGCAGCAG CGCCGCGTGG TTCGTGAGGC TCCGCCACTG
CCCCATGACC TCTCTGGCGA CGACGATACC GTCCTCGTCC CCTTCTTGGA GGTGGCGACC
GCCGAGGGTC CCGTCATCCT GCCGACGAGC CTGCCCGGTG CCCCACTCGG ATCAGACGGC
CTACCACAGG TCCGGGCACA GGTCCTCCGC CATCGCTATG GCGCCACCGT GACCCGTACG
CTGCCTGGGG GGCCGCTGCC CAACGGTGCT CCCGCCCGTC CCACGTACGC CGCCAACCAG
ATCCTGACGC AGCGGACCCT CGCGCGCCGC GGATTTGGCT CGTGGGAGCT GCGCTTCGTG
GCAGCCCGAG AGCAGGTCAC GCTCGAGCGC GTGCTCGACG ACGTCGCGAG CGGGCGGGCG
GTCGTGCCGG CAAATCCCAA CCATCCGGAA CTCGAACCGA CGATCATCGG CCGGAACTAC
CGGACCAAGG TGAACGTCAA CCTCGGGGCG TCGAGCGTAC GCGCCGACAT CGACGAAGAA
CTCGCCAAGG TCGCGGTGGC GCTCCAGGGT GGCGCCGACA CCATCATGGA CCTCTCCACC
GGGACCAAGC TCGCCTGGGT GCGCGAGTGG ATCCTGCGCA ACAGCTCGGT TCCGGTGGGC
ACCGTGCCGA TCTACGAAGC GCTCGATCGC GTCGGTGGTC GGCCCGAGCG GCTGAGCTGG
TCGCTGTTCG CCGAGGTGCT CGAGGAGCAG GCGCTCCAGG GGGTCGACTA CGTCACGGTG
CACGCCGGCC TGCTCCGCGA CTACGTGCCG CTCGCGGCAC GCCGGACCAC CGGTATCGTC
TCGCGCGGCG GCTCCCTCAT GGCCGCATGG AGTCAGCATC ACCAACGCGA GAACTTCTTG
TTCGAGCACT TCGATGAGCT GCTTGCTATC GCCGGTCGCT ACGACCTCAC GCTCTCGCTC
GGCGACGGCC TGCGGCCCGG CTCCACCGCA GATGCCAACG ACGAAGCTCA GCTGGCCGAG
CTCCGCACGC TCGGCGACCT CGCACGACGA GCTGGAGAGG TCGGCGTCCA GGCCATGATC
GAAGGGCCAG GCCACGTCCC ACTCCACAAG ATCGCGGAGA ACGCACTGCT CGAGCAAGAA
CTCTGCGACG ATGCGCCGTT CTACACCCTC GGACCCCTCG CGATCGATGT TGCGGCGGGG
TGGGATCACG TCTCATCGGC GATCGGAGCT GCCGTGATCG GAGCGCACGG GGCAGCCATG
CTGTGCTACG TCACGCCCAA GGAGCACCTC GGCCTCCCGA ACCCGGAGGA CGTGCGTGCG
GGGCTCATCG CCTATCGCAT CGCCGCGCAC GCAGCCGATC TCGCCAAGGG GATCAACGGC
GCACAGGCGT GGGACGATGC CATGAGCCGA GCCCGCTACG AGTTTCGCTG GAACGACCAG
TTTGCCCTCG CCATCGATCC CGCAGGAGCG CAGGCACACC ACGACGAAAG CCTGCCAGCG
CGCGCAGCCA AGGATGCCGA GTTCTGCTCC ATGTGTGGGC CGAACTTCTG CGCGATGGCA
CACTCGCATC GCGCGCTTCA CGACGCCTGA
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| Protein sequence | MNTIPVASLR RRHVDEAPTD HVVQAAHPQQ RRVVREAPPL PHDLSGDDDT VLVPFLEVAT
AEGPVILPTS LPGAPLGSDG LPQVRAQVLR HRYGATVTRT LPGGPLPNGA PARPTYAANQ
ILTQRTLARR GFGSWELRFV AAREQVTLER VLDDVASGRA VVPANPNHPE LEPTIIGRNY
RTKVNVNLGA SSVRADIDEE LAKVAVALQG GADTIMDLST GTKLAWVREW ILRNSSVPVG
TVPIYEALDR VGGRPERLSW SLFAEVLEEQ ALQGVDYVTV HAGLLRDYVP LAARRTTGIV
SRGGSLMAAW SQHHQRENFL FEHFDELLAI AGRYDLTLSL GDGLRPGSTA DANDEAQLAE
LRTLGDLARR AGEVGVQAMI EGPGHVPLHK IAENALLEQE LCDDAPFYTL GPLAIDVAAG
WDHVSSAIGA AVIGAHGAAM LCYVTPKEHL GLPNPEDVRA GLIAYRIAAH AADLAKGING
AQAWDDAMSR ARYEFRWNDQ FALAIDPAGA QAHHDESLPA RAAKDAEFCS MCGPNFCAMA
HSHRALHDA
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