| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1857 |
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| Symbol | |
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| ID | 8323952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1942381 |
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| End bp | 1943697 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952989 |
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| Product | Arsenical pump membrane protein |
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| Protein accession | YP_003110444 |
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| Protein GI | 256372620 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAGCC TCCACGGACC CGCCCTCATC GTCACGGCCA TCGCGATCTT CGTCGCGACC
CTGGCCCTCG TGATCACGCA ACCCAAGGGA CTGTCGATCG GCTGGTCAGC GACCGGAGGC
GCGCTGCTCG CTCTCGCGCT CGGCGTCGTC CACCTCACCA ACGTCGTCAC GGTTTGGGGA
ATCGTCTGGA ACGCCACCGC GACCTTCGTC GCGTTGATCG TGATTTCTAT GGTGCTCGAC
AGAGTGGGGT TCTTTCGGTG GGCCGCACTC CACGTCCTGC GCGCAGCCCA CGGCAGTGCC
GTCCGTGCCT TCTTCTACGT GCTCATCCTT GGCGCGGTGG TCGCAGCCCT CTTTGCGAAC
GACGGCGCAG CGTTGATCTT GACTCCGATC GTGTACGAGC AAGTGCGTGC ACTCGGGTTC
GGGCCTCGTC AGGCGCTCCC GTTCGTGATG GCGGCAGGCT TCATCGCCGA CACAACGAGC
CTCCCGCTCA TCGTGTCGAA CTTGGTCAAC ATCGTGAGTG CCAACTACTT CCACATCGGC
TTTGCTACCT ACGCCAAGAC GATGGCCCCA GTCGACCTCG TGGCCTTCGT CGCGAGCACC
GCGGTCCTCT ACCTCTTCTA TCGGCGGATG CTGCCTGGTC GTTACGATCC GAACGCGCTT
GCCGCTCCCC ACAGCGCCAT CGCGGACCAC GGCCTGTTTC GGGCCAGCTG GGTGGTGCTC
GGGGTCCTGC TCGGCGGCTA CTTCCTCTCG GAGCCGCTCC ACTTCGTGGT GTCGATCCCC
GCCGGTCTTG CGGCGATCTT CCTCCTGCTC CTCGCCTCCC GCTCTGCCGC ACTCTCCTCG
GCCGCCGTGC TCCGCGAAGC CCCGTGGAGG ATCGTGGTGT TCTCGATCGG CATGTACCTG
GTCGTCTTCG GGCTGCGCAA CGCTGGTCTG ACCACTTTCC TCTCCGACGC CCTCAGCGCA
ACCGCTCGCG CCGGACTCGT GCCAGCGGCC CTTGCGAGTG GCTTCGGTGC TGCCGCGTTG
TCTGCGGTGA TGAACAACTT GCCGACCGTC CTCATCGGTG CGCTGTCGAT CAACGGAGCA
CATCTCGCAG GACTCGCTCG GACGGCGTCG GTGTTCGGCA ACGTGGTCGG ATCAGACCTC
GGCCCGAAGT TCACCCCGAT CGGCTCCCTC GCGACGTTGC TCTGGCTCCA CGTCCTCGAG
ACCAAGGGCA TCAAGATCAG CTGGGGCCGC TACTTCCGCC AAGGCATCGT GCTCACCGTT
CCGGTCCTTG CCATCACGCT GGCGGCCCTG GCAGGGTGGG TCGCCATTGC GCACTGA
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| Protein sequence | MLSLHGPALI VTAIAIFVAT LALVITQPKG LSIGWSATGG ALLALALGVV HLTNVVTVWG
IVWNATATFV ALIVISMVLD RVGFFRWAAL HVLRAAHGSA VRAFFYVLIL GAVVAALFAN
DGAALILTPI VYEQVRALGF GPRQALPFVM AAGFIADTTS LPLIVSNLVN IVSANYFHIG
FATYAKTMAP VDLVAFVAST AVLYLFYRRM LPGRYDPNAL AAPHSAIADH GLFRASWVVL
GVLLGGYFLS EPLHFVVSIP AGLAAIFLLL LASRSAALSS AAVLREAPWR IVVFSIGMYL
VVFGLRNAGL TTFLSDALSA TARAGLVPAA LASGFGAAAL SAVMNNLPTV LIGALSINGA
HLAGLARTAS VFGNVVGSDL GPKFTPIGSL ATLLWLHVLE TKGIKISWGR YFRQGIVLTV
PVLAITLAAL AGWVAIAH
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