| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1830 |
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| Symbol | |
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| ID | 8323924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1915955 |
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| End bp | 1917025 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952961 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003110417 |
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| Protein GI | 256372593 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCAC CCGTGCACTC ACCTGAGCCA GCGCTCCTCG CGGCGCTTGC CCGTCGGCCC
GGTCACCACG TTCCCGTTTG GTTCATGCGC CAGGCTGGTC GCTCCCTCCC CGAGTACCGC
GCAGTGCGCG GCGTGGAGTC CATCCTCACG GTCCTCGAGG ATCCCGAACT GGCCGCGACG
ATCACCCTGC AGCCCGTCGA GCGCTACCAC GTCGATGCGG CCATTCTGTA CAGCGACATC
ATGGCACCGC TCGCCGCAGC AGGGGTCGGG GTGGACATCG TGCCGGGCCT AGGTCCGACG
TTCGACCCGC CGATCCGTGC ACGCAGCGAC CTTGCACGTC TCGACCGGTT CCACCCCGAA
GCGCTCGAGG CCATGGCGTC AACGGTCCGG CTCGTCACCG CCGCCTCCCC CGTGCCGCTG
ATCGGGTTCG CCGGCGGACC CTTCACCGTG GCGAGCTACC TCATCGAAGG TCGCCCCTCG
CGTGACTACA GCGCCACAAA GCGGCTGATG CTCGCCGATG CCGGCCTGTT CGCCGCCCTC
CTCGAGCGCC TGACCGACAT CGCTGCGGCC AGTATCGCCG TCCAAGTCGA GGCGGGCGCA
AGTGCGGTCC AGATCTTCGA CTCCTGGGCC GGAGCCCTGT CCGGACCAGC CTTTCGGGAC
CACGTCGCCC GCCACCTCCG GCGCCTCGCA GCCGTCATCG GCGAGCTCGG CGTTCCGTCC
ATCTACTTCT CGGTCGGCAC GGCGCACCTC GAGGCCGACA TCTGCGAACT CGGCTTCGAC
GCCGTCGGGA TCGACTGGCG CGTTGACCTC GAAGGGTTCG CGACTCGCCA CGGGAGCCGG
CTCGCACTCC AGGGGAACCT CGACCCCGCA TATGTCTTGG CCCCCGTCGA TGTCGTCCTC
GCCGAGGCAC GAGCGGTCCT CACCGCCTCG GCTCCCGCGC CTGGCTATGT CTTCAATCTC
GGCCATGGCG TCCTGCCCGA ATCCGATCCC GACGTTCTCG CCCGCGTCGT CGACCTCGTG
CACGACGAGG GCACCCGGCT GCGGACGAAC GCGCTGGAGG CGACTTCGTG A
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| Protein sequence | MASPVHSPEP ALLAALARRP GHHVPVWFMR QAGRSLPEYR AVRGVESILT VLEDPELAAT
ITLQPVERYH VDAAILYSDI MAPLAAAGVG VDIVPGLGPT FDPPIRARSD LARLDRFHPE
ALEAMASTVR LVTAASPVPL IGFAGGPFTV ASYLIEGRPS RDYSATKRLM LADAGLFAAL
LERLTDIAAA SIAVQVEAGA SAVQIFDSWA GALSGPAFRD HVARHLRRLA AVIGELGVPS
IYFSVGTAHL EADICELGFD AVGIDWRVDL EGFATRHGSR LALQGNLDPA YVLAPVDVVL
AEARAVLTAS APAPGYVFNL GHGVLPESDP DVLARVVDLV HDEGTRLRTN ALEATS
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