Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1817 |
Symbol | |
ID | 8323911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1902656 |
End bp | 1903582 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952948 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003110404 |
Protein GI | 256372580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.296276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGCGAT CAACGGCCCC CTCTCCCACC TCGCACCCAG CGATCACCGT GAGCGTCGTC ATCGCCGCCT ACAACGCCGC GGCCACGATC ACCGACGCGC TCGAGAGCGT GCACCGCCAG CAGTATCCCC CGATCGAGAT CATCGTCGTC GACGATGGCT CGACCGACGA CACCATCGCG GTCGTCGAGC GCAGCGGCCT TACGAGCGCC ATCATCCGTC AAGCCAATCA AGGCCCGTCG CGTGCTCGCA ACGCCGGGGT CCGCGCAGCC CACGGAGACT GGATCGCGTT CCTCGACGCC GACGACGTGT GGCATCCAGC CAAGCTCGCC GAGCAGGTCG CGGTCGTCGA GCGCCACGGC GACGCAGCGA TCGTCGCCAC CGATTGGGCG CGGGCCCTCG ACCAGCTCGG GGTGCCTGCC GCGAGCCACC TGGAGTGGTT CGGCTACCGC GACCTCGTCG TCTTGAATCG CTTTCAGACC TCCACCGTCC TCATGCGACG CGCTGTGCTC GATGCGATCG GAGGATTCGA CGCCTCGCTC GACGGCGTCG AAGATTGGGA CTGCTGGTTA CGCGGTGCAC TCCACGGCCC GGTGGCACTC CTTCACGCCC CGCTCGTCCT CTACCGCGAC AGTCCGGGTG GCGTCTCGAA GGATCTCCGA CGCCTGCGCG CAGGAGCGAT CGCCGTCATG GAGCGCGAGC GCCAGCGCGG GGTGCTCCAT CCCGACGACG CACAGGACCT TCTCGCATGG CACCTCGAAC GGCTCTTCGT CGCCGAGGTC CTGGTTCGCG ATTGGCCCGG TGCGCTCGAC GCGCTGAAGG ACGTCCTGCT CGCTCCGCCC CACGCTCACC TTCGCGCTGC GAGGGGCCTC CTCGGACCGT TCCTCCTCGA ACGACTCAAC CGGCGGCGCG GTCGCGCCGC GGCGTGA
|
Protein sequence | MERSTAPSPT SHPAITVSVV IAAYNAAATI TDALESVHRQ QYPPIEIIVV DDGSTDDTIA VVERSGLTSA IIRQANQGPS RARNAGVRAA HGDWIAFLDA DDVWHPAKLA EQVAVVERHG DAAIVATDWA RALDQLGVPA ASHLEWFGYR DLVVLNRFQT STVLMRRAVL DAIGGFDASL DGVEDWDCWL RGALHGPVAL LHAPLVLYRD SPGGVSKDLR RLRAGAIAVM ERERQRGVLH PDDAQDLLAW HLERLFVAEV LVRDWPGALD ALKDVLLAPP HAHLRAARGL LGPFLLERLN RRRGRAAA
|
| |