| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1814 |
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| Symbol | |
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| ID | 8323907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1897895 |
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| End bp | 1899175 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952944 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003110401 |
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| Protein GI | 256372577 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.040954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGAGC GCCTCGGTGC GCTCCCAGTG CGCCTGTGGC CTCGTGGGGC GGGCATCGGC
GCGAGCGGCG AGCTGACGAT CCAGGGCATC AGCGTGCACG AGCTGGCCGA TCGCTTCGGC
ACGCCGCTGT TCGTCTACGA CGAGGACGAG GTACGAGCAC GCATCGACGA GCTGCGGTCG
GGGCTGGGTG CGCTGCAGGT GACCTATGCG TCGAAGGCGT TCTCTGCGGT GGCGATGGCC
CGCATCGTCG CCGACACCGG GCTCTGGTGG GACGCTGCCT CGGCCGGGGA GCTCGAGGCG
GCTCGTCGAG GCGGCGTGCC TGCGGAGCGT ATCGTACTCC ATGGCAATAA CAAGGGCGTC
GATGAGCTCC TGCTCGCCGA CGAGGTTGGG GTCGGCAGAA TCGTTGTCGA CGCCCACGAG
GAGCTCGAGC GCATCGCGCG TCTTGGTCTC GGCCGTCGGC GACTCTGGCT CCGCGTCGTG
CCGGGGATCG AGGCCCACAC CCACGCCTTC GTCCGCACGG GGCAGGTCGA CTCCAAGTTC
GGGCTTCAGC TCGACGATGG CTCTGCGGAG CGAGCACTCA CGTGGGCGCG TGCGCACGGC
CTCACGGTCG TGGGGATCCA CGCCCATATC GGGTCACAGA TCTTCGACCT CGATCCCTTC
GGCGAGCTCG CCGGGCGTAT GGGGGCGGTG CGCGAAGCCT GGGGGGTCGA CGAGGTCAGC
CTCGGTGGCG GCATTGGCGT GCCCTACGTC CGTGACGAAC GGGCACCGAC GCTCGAGGAG
TGGGGGCGCT CCATCGCCGA GGCGACAACG CTGGCCGGCA TGGATCCGGA GCGCACCTTC
GTCGAGCCGG GCCGCGCGCT GGTGGCTCCC GCCGCGATCA CGCTGTACCG TGTCGGCGTG
GTCAAGCGGA TCCCGGGGGT GAGGACCTAC GTGGCCGTCG ACGGGGGCAT GTCGGACAAC
CCTCGACCGG TGCTCTACGG GTCTGGCTAC GAGGCCGTCG CCGCCGGCCG ACTCGAGGCG
CCGCACACGA CGGCGATGCG CGTGGTCGGT AAGCACTGTG AGTCCGGAGA CGTGCTGGTG
GCCAACGCCC TGTTGCCGGA AGACCTCGCT GCTGGCGAGC TCATCGTGAC TCCGGTCACG
GGGGCGTACG GCTACTCGAT GGGGTCGAAC TACAACCGGT TGCCGCGTCC GAGCGTGGTC
ATGGTTCGTG ACGGCGTCGC CCGCGAGATC GTCCGTCGCG AGCAGCTCGA TGATCTGTTC
CGTCTGGAGG TGGGCTCGTG A
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| Protein sequence | MGERLGALPV RLWPRGAGIG ASGELTIQGI SVHELADRFG TPLFVYDEDE VRARIDELRS
GLGALQVTYA SKAFSAVAMA RIVADTGLWW DAASAGELEA ARRGGVPAER IVLHGNNKGV
DELLLADEVG VGRIVVDAHE ELERIARLGL GRRRLWLRVV PGIEAHTHAF VRTGQVDSKF
GLQLDDGSAE RALTWARAHG LTVVGIHAHI GSQIFDLDPF GELAGRMGAV REAWGVDEVS
LGGGIGVPYV RDERAPTLEE WGRSIAEATT LAGMDPERTF VEPGRALVAP AAITLYRVGV
VKRIPGVRTY VAVDGGMSDN PRPVLYGSGY EAVAAGRLEA PHTTAMRVVG KHCESGDVLV
ANALLPEDLA AGELIVTPVT GAYGYSMGSN YNRLPRPSVV MVRDGVAREI VRREQLDDLF
RLEVGS
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