| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1779 |
|---|
| Symbol | |
|---|
| ID | 8323872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1864916 |
|---|
| End bp | 1865689 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644952909 |
|---|
| Product | Enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_003110366 |
|---|
| Protein GI | 256372542 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT TTGTCCACGT CGAGAGGGAC GATGCAGGCG TCGCCACCGT ACGGCTCGAT
CGGCCGAAGG CAAACGCGCT CTCGGGCGCG GTGCTCGCCG AACTCGCAGC CGCGGCCTCG
GACCTGGAGC GAGACTTGCC CCGCGCCGTG GTCGTGACGG GTGGCGATCG CATCTTCGCG
GCCGGCGCGG ACATCGCGGA GTTCGACGAG CGCCCCGTGG GGTGGGAGAC CGCCCGGGCG
TTCCACCGCG CGTTGGGGGC CATCGCGGCG CTCCCACGCG TGGTGATCGC AGCGATCGAG
GGGTACGCCC TCGGGGGCGG CCTCGAGCTC GCCCTCGCGT GCGACCTACG GGTGGCGAGT
TCGTCGGCCA AGCTCGGCCT CCCGGAGATC TCGCTGGGCT TGATCCCGGG TGGCGGCGGC
ACACAACGGT TGCCTCGGCT CGTCGGGTTG GCGGTCGCGA AGCGTCTCGT CCTGACCGGG
GAGCCGCTCA CGGCTGCCGA GGCACTCGGC GTGGGGCTCG TCGACCGCGT CGTCGAGCCA
GGGCAGGCGA CCGAGGCGGC GCGAGCGTGG GCGCAGCGCT TCGCGTCGGG TCCGCTCGCA
GCACTCGCGT TCGCGAAGGT CGCGCTCGCC GAGGGGACGC AGGGCTCGCT CGAGGAGGGG
CTCGCGCTCG AACAGGCACT CTTCGCGCAG GTGTTCACCA CCGAGGACGC GCGCATCGGT
GTGCGGTCGT TCCTGACCGA TGGGCCGGGA CGAGCGAACT TCGTGGGACG GTGA
|
|---|
| Protein sequence | MSEFVHVERD DAGVATVRLD RPKANALSGA VLAELAAAAS DLERDLPRAV VVTGGDRIFA
AGADIAEFDE RPVGWETARA FHRALGAIAA LPRVVIAAIE GYALGGGLEL ALACDLRVAS
SSAKLGLPEI SLGLIPGGGG TQRLPRLVGL AVAKRLVLTG EPLTAAEALG VGLVDRVVEP
GQATEAARAW AQRFASGPLA ALAFAKVALA EGTQGSLEEG LALEQALFAQ VFTTEDARIG
VRSFLTDGPG RANFVGR
|
|---|
| |