Gene Afer_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1750 
Symbol 
ID8323842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1838566 
End bp1839132 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID644952882 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_003110339 
Protein GI256372515 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGGTCG GGCTCGTCAC CTCGAATTCG CACAAGTTGG CGGAAGCGCG ACGCATCCTC 
ACCGACTTCG AGGTCGTGGG GATCGACGTC GGTGAGGTCG CCGAGACCGG GTCGACCTTC 
GAGGAGAACG CGATCATCAA GGCCGAGGCG GGACGCGGGC GAGCGCCGAT CGTGATCGGG 
GAGGACTCGG GACTCGTCGT GGACGGCCTC GACGGTGCCC CAGGCATCTA CTCCGCTCGC 
TATGGGCCGA CGGATGCGGA GCGTATCGCG CGTGTGCTCC AGGAGCTCGG ATCGACGCGT 
AGTCGCCGTG CCCGCTTCGT GGCGGTGGTG TGCGCCGTGG TCGACGAGGA CCCGCCGCGA 
TGCTTCGAGG GTGTCGTCGA GGGGGCCATC GCACTCGAGC CCCGTGGCGA GCAGGGATTC 
GGGTACGACC CCATCTTCAT CCCGCTCGGT GGCGACGGCC GAACGTTTGC CGAACTCGGT 
GAGTGGAAGG ACGCGCTGTC GCATCGAAGG CGGGCGCTCG TCGGCTTCGC CGACTGGGCG 
AGAGCTTTCG CTGATCGCGA CCGGTGA
 
Protein sequence
MRVGLVTSNS HKLAEARRIL TDFEVVGIDV GEVAETGSTF EENAIIKAEA GRGRAPIVIG 
EDSGLVVDGL DGAPGIYSAR YGPTDAERIA RVLQELGSTR SRRARFVAVV CAVVDEDPPR 
CFEGVVEGAI ALEPRGEQGF GYDPIFIPLG GDGRTFAELG EWKDALSHRR RALVGFADWA 
RAFADRDR