| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1742 |
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| Symbol | |
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| ID | 8323833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1828145 |
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| End bp | 1831243 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644952873 |
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| Product | SpoIID/LytB domain protein |
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| Protein accession | YP_003110331 |
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| Protein GI | 256372507 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG2385] Sporulation protein and related proteins |
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| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.334202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGTCG GAGGGCGCCG TATTCCGCTC GCGGGCGCAG CGATCGCGCT CGGAGCCCTT
GTCGCGGCGC CGGCGCATGC ACCGGCGATG ACGCCAACGT CGACCAGCGG CGAGCTCACC
TTCACCGGGT TCGGTGTCGG TGGAGGCTCC GGCGCTTCGC AGTTCGGCGA GATCGGCTAC
GCCAGTGTGG GCCAGGACTC CTATCAGGCC ATCCTCGCGC ACTTCTACGG TGGGACCACG
CTCACGACGG CTGCCGACCA GGCAGTGCGC GTCTGGATCA CCGAGGCCAA CGGGGGCCCC
GTTGTCGTCT TCGATCCATC CGGTTTGAGC GTCGGTGGCG TCAGCGTCGG TGCGAACGTC
CCGGTGGAGC TCACGGATCA GGGTGGCACC ATGGTTGCGG CGGTGGGGCA AGCCGCCACG
GGCTGCGGCT CCCCAGGAGG GTGGAGTAAC CTCACGAGCG CACCTGGTTC GCTGTGGGTG
TCGCCGCCGT CGCTGCCGCC GGTCGGTCAG CAGGTCGACG AGCCGGCCTC GTCGGCACTC
GTGTGGTGTG GGCCCGGCGG CAGCGAGCGG AGCTATCGCG GCCAACTCGA GGTGCTCCAG
GATGGCTCGG GCCAGATGGT GCTCGTCAAT GAGCTCGGGC TCGAGTCCTA CGTGCTCGGT
GTGGTGGCGA ACGAGATGCC GGCCTCATGG GGCCTCCTCG GCGCTTCCGG TCCGCAAGGG
GAACCATGGG GTTTCCAGGC GCTCGAGGCT CAGGCCGTCG AGGCCCGAAC CTATGCGCTC
GCGGTCGGCA ACGGCTACGG GTTCGCGACC ATCTGCGACA CCTCGGCGTG CCAGGTCTAC
GGCGGTGTGA ACAACGGGTT GAGCGCGCCG TATCGGCCGC TGGTCGAGCA GGCGGTGGCG
GACACGGCGC ACGAGGTGCT CGTGACCGCC TCCGGAGCGC CTGCGTTCAC GCAGTACTCG
GCCTCCGATG GCGGTTACAC GGCACCCGGT ACGTTTCCCG CCGTTCCCGA TCCCTACGAT
GCGGGCTGCT ACGGCAACAT CTGTAACCCC TGGAACCCCT GGACGCAGAG CGTCTCGCTC
GCGTCGGTCG AGGCCGCATT CCCCTCGATC GGCACACCCA CCGGACTCGC GGTCGATGCG
CGCAACGGGC TCGGTAACGA CGGCGGACGA GTGACCTCGA TCACCGTGAG CGGCACGAAC
GGGTCGGTGA CCGTCTCGGG CGCAACGTTC GCTGGTGCTC TCGGACTCCC CTCGGCCTGG
TTCGTCGCGA GCGGACCGAT CGCGATCTCG AACGACGCGA GCGCCTCAGC CCCCGCACCG
CCCCCGACGC CGCCCGAGTC GCCGAGCCTC GGCAACGGGG TGCTCGAGAC CACCCCAGCC
GGAACCGTGG TGGCCGCCGA CGGTGCCACC AGTCTCGGCG ACACCGCTAC CCTCGGCATC
ACCGGCCTCG GCGGCTCCCA CCCCCTGGCT GCACCCGTGG TCGGGATCAC CCGCGACCCG
AGCGGCCAGG GCTACTGGTT GGTGGCGGCC GACGGCGGCG TCTTTGGCTT CGGTGACGCA
CCCTTCTTCG GGAACACCTA TACCCTCGGC ATCACCGGCC TCGGCGGCTC CCACCCGCTC
GCCGCACCGG TCGTCGGGCT CAGCCCCACC CCCGATGGCC AGGGCTACTG GTTAGTGGCC
GCCGACGGCG GCGTCTTCAG CTTCGGTGAC GCGGGTTTCT ACGGCAATAC CTACACGCGC
GGCTTCACCG GCCTCGGCGG TGCTCATCCG CTGCCAGCGC GTGTCGTGGC GCTTGTGCCT
ACCCCTGACG GCAAGGGCTA CTGGCTCGCC CTTGCGAACG GCACCGTGCT CGCCTTCGGC
GACGCCACGA ACCTCGGCGG GCTTCCGGCG GCACCCGCCA GCCCGATCGT CGCCATGCTC
GCGACCCCCG ATGGCCAGGG CTACTGGCTG CTCGCCGCCG ACGGTACGGT CTACGGCTTC
GGCGATGCGC CGAGCTACGG ATCGCTCACG CCGGGAACGG CGAGCGCGAT CGGACTCGTG
CCCGGTCCCG GTGGCCAGGG CTACTCCATC GTCCTGTCGT CGGGCGCCCT CGTCGGCTTC
GATGGAGGGG TGAGCATCGG CGCCACCGCA CCCGCTGGCG GTGCGGTGGG CGCGATCGCG
GCGGTCGGCA CCCCGGCGAC GAACGCGCAG TCGGCGACCA CCCCGACGAC GACCTCGCCA
ACGACGCCTG CTCCACCATC GTCGTCGCCG ACGGGGAACG TCGGGCTTCG CGGCGTCACG
GCGGATGGGA CCGTGGTGGC CGCCGACGGT GCCACCAGTC TCGGTGACAC CGCCACCCTT
GGCATCACCG GCCTCGGTGG CTCCCATCCG CTCGCCGCAC CGGTCGTCGG GCTCAGCCCC
ACCCCCGATG GCCAGGGCTA CTGGTTGGTG GCCGCCGACG GCGGCGTCTT TGGCTTCGGT
GACGCACCCT TCTTCGGGAA CACCTATACC TTGGGTCTCA CCGGCCTCGG CGGCTCGCAC
CCGCTCGCCG CACCGGTCGT CGGGCTCAGC CCCACCCCCG ATGGCCAGGG CTACTGGTTG
GTGGCCGCCG ACGGTGGCGT CTTTGGCTTC GGTGACGCAC CCTTCTTCGG GAACACCTAT
ACCTTGGGTC TCACCGGCCT CGGCGGCTCC CACCCGCTCG CCGCACCGGT CGTCGGGCTC
AGCCCCACCC CCGACGGCCA GGGCTACTGG TTGGTGGCCG CCGACGGCGG CGTCTTTGGC
TTCGGTGACG CCCACTTCTA CGGCAATACC TACAGTGCCG GCTACTCAGG CCTCGGCGGC
TCGCACCCGC TCCCTGCCCC AGTGGTCACG CTCGTGCCGA CGGCCGACGG CCAGGGCTAC
TGGCTCGTGC TTGCGAACGG CGATGTCTTT GCCTTCGGCG ATGCATCGGA CCTCGCGAGC
GCCGATGTCG GCTCTGCCAC CGTGGTGAGT GCTGCGCGCG CAGGTGCCGG TCTCGAACTG
GTGTTGTCCT CCGGCGCCAT CGTGGGGCTT GGCGGCGCCC CGAGCGCCCC TGCGCCTGGC
GGCGTCGATC TGGTCGGGGG CACCGCGGTC GCGGGGTAA
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| Protein sequence | MRVGGRRIPL AGAAIALGAL VAAPAHAPAM TPTSTSGELT FTGFGVGGGS GASQFGEIGY
ASVGQDSYQA ILAHFYGGTT LTTAADQAVR VWITEANGGP VVVFDPSGLS VGGVSVGANV
PVELTDQGGT MVAAVGQAAT GCGSPGGWSN LTSAPGSLWV SPPSLPPVGQ QVDEPASSAL
VWCGPGGSER SYRGQLEVLQ DGSGQMVLVN ELGLESYVLG VVANEMPASW GLLGASGPQG
EPWGFQALEA QAVEARTYAL AVGNGYGFAT ICDTSACQVY GGVNNGLSAP YRPLVEQAVA
DTAHEVLVTA SGAPAFTQYS ASDGGYTAPG TFPAVPDPYD AGCYGNICNP WNPWTQSVSL
ASVEAAFPSI GTPTGLAVDA RNGLGNDGGR VTSITVSGTN GSVTVSGATF AGALGLPSAW
FVASGPIAIS NDASASAPAP PPTPPESPSL GNGVLETTPA GTVVAADGAT SLGDTATLGI
TGLGGSHPLA APVVGITRDP SGQGYWLVAA DGGVFGFGDA PFFGNTYTLG ITGLGGSHPL
AAPVVGLSPT PDGQGYWLVA ADGGVFSFGD AGFYGNTYTR GFTGLGGAHP LPARVVALVP
TPDGKGYWLA LANGTVLAFG DATNLGGLPA APASPIVAML ATPDGQGYWL LAADGTVYGF
GDAPSYGSLT PGTASAIGLV PGPGGQGYSI VLSSGALVGF DGGVSIGATA PAGGAVGAIA
AVGTPATNAQ SATTPTTTSP TTPAPPSSSP TGNVGLRGVT ADGTVVAADG ATSLGDTATL
GITGLGGSHP LAAPVVGLSP TPDGQGYWLV AADGGVFGFG DAPFFGNTYT LGLTGLGGSH
PLAAPVVGLS PTPDGQGYWL VAADGGVFGF GDAPFFGNTY TLGLTGLGGS HPLAAPVVGL
SPTPDGQGYW LVAADGGVFG FGDAHFYGNT YSAGYSGLGG SHPLPAPVVT LVPTADGQGY
WLVLANGDVF AFGDASDLAS ADVGSATVVS AARAGAGLEL VLSSGAIVGL GGAPSAPAPG
GVDLVGGTAV AG
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