Gene Afer_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1740 
Symbol 
ID8323831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1825973 
End bp1827361 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content70% 
IMG OID644952871 
ProductFAD linked oxidase domain protein 
Protein accessionYP_003110329 
Protein GI256372505 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC CCATCGACGC GGCGACCGAT CAGGCCCCAC CCTTCGAGGA GCGTTGGACG 
CTCCTCGAAG GGTGGGGCCG AACGCCCCGC TCGGCGGCGT GGCTTCGCGA AGCGACAGAC
GACGCCGTCG TCGATGCCCT CTGTAGCCAG GGCCCCCGCC CGGTGCTCGC CCGCGGCCTC
GGACGCAGCT ACGGCGACGC GGCGCTCGCG GCAGGCGGGA TCGTGCTGGA CATGACCAGC
CGCCAGCCGG TCGTCACCCT CGACCAGCAT CGCGGCGTCG CCGTCGTCGA CGCGGGTACC
TCGCTTGCCC ACCTCGCTGC GAGTGTGCTC CCCCACGGTT GGTTCCTCCC CGTCACCCCC
GGCACCAAGC ACGTCACCGT CGGCGGTGCG ATCGCCGCCG ACGTCCATGG CAAGAACCAT
CACCGAGACG GATCGTTCGG CGGCTACGTC GAGCGACTCT GGCTGGCCAC GCCGGAGGGC
ATCGTCGAGC TCGCGCCACC CGATGAGCGT TTCTGGGCGA CCGTGGGCGG CATGGGACTG
ACCGGGGTCA TCCTCCGAGC CGCCGTTCGG CTCATCCCGG TCGAGAGCCG CTTCGTCCTC
GACCGAGAAG TCGCGACGTC GTCCCTCGAC GAGACCATCG AGGTCCTCGC CGACGACAGT
TCGGTTCGCT ACTCCGTCGC ATGGCTGGAC GCGACGGCTA CCGGAGCTCG CCTCGGCCGC
GGCCTCGTCT CGTTCGCCGA CCACGCACCC GCCGACGCAC TCCCGGCCTC GCTCGCTCAC
GACCCACTCC GACTGCCGCG CGAGCGAACG CTGCCCGCAC CTCCAGATCG CATCCCCTCA
GGGCTGCTGT CGGTGCCCAC GATTCGGGCG TTCAACGAGC TGTGGTACCA GCGTGGACGG
CGTCGGCCGG AGACGGCCCT CGTCGACCTG CGCTCGTACT TCTATCCGCT CGACGCCGTG
AACGGTTGGA ACCGTCTCTA CGGCCCACGA GGTTTCGTGC AGTACCAAGT GGTCGTCCCG
AACGACGCCG TATCGGTGAT CAGGCGCATC CTCACCGACC TCGTCGAGCA TGGGCATCCG
TCGTTCCTCA GCGTGCTGAA GCGCTTCGGG CCAGCGGGGA ACGGTTGGCT CTCGTTCCCC
ACCGCAGGCT GGACTCTCGC GCTCGATCTC CCGGCGCGCC GGAGCGACCT CGAGACCCTC
CTCGTGCGCC TCGACGCCCT CGTGCTCGAG GCCGGAGGTC GCGTCTACCT CGCCAAGGAC
GGACGGCTTC GACCTGAGTC CGCTCGGGCG ATGTACACCA GGATCGACGA CTTCCAAGCG
CTGCGTGCAC GCCTCGGTGT ACGAGGCGTC ATCAGCTCCG ACCTCGCCCG CCGCCTGCAC
CTCGACTAG
 
Protein sequence
MSQPIDAATD QAPPFEERWT LLEGWGRTPR SAAWLREATD DAVVDALCSQ GPRPVLARGL 
GRSYGDAALA AGGIVLDMTS RQPVVTLDQH RGVAVVDAGT SLAHLAASVL PHGWFLPVTP
GTKHVTVGGA IAADVHGKNH HRDGSFGGYV ERLWLATPEG IVELAPPDER FWATVGGMGL
TGVILRAAVR LIPVESRFVL DREVATSSLD ETIEVLADDS SVRYSVAWLD ATATGARLGR
GLVSFADHAP ADALPASLAH DPLRLPRERT LPAPPDRIPS GLLSVPTIRA FNELWYQRGR
RRPETALVDL RSYFYPLDAV NGWNRLYGPR GFVQYQVVVP NDAVSVIRRI LTDLVEHGHP
SFLSVLKRFG PAGNGWLSFP TAGWTLALDL PARRSDLETL LVRLDALVLE AGGRVYLAKD
GRLRPESARA MYTRIDDFQA LRARLGVRGV ISSDLARRLH LD