| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1732 |
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| Symbol | kgd |
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| ID | 8323823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1815072 |
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| End bp | 1818905 |
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| Gene Length | 3834 bp |
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| Protein Length | 1277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952863 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_003110321 |
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| Protein GI | 256372497 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.925141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGCG CACCCGACAA CAGCACTGTG CAGCATTCGG CCTCCGAACA GTTCGGACCC
AACGACTGGT TCGTCGAGGA GATGGCGGAG CGCTACCGAG CCAATCCCCT CCTCGTGCCT
GAGAGCTGGC GTGCGTACTT CGAGGGTGAG CGCGTCCCCG ATGGCGTGGC GACGAAGACC
ATCGCCACCG CTACGGCGAA AGAGCTCGTT GGCTTCGAGG CTCCAGGCGT CGCGACACCT
CCGACGACGG CGACACCGGC GCCGACTTCG CCTCCGCACA ACGGAGCCAC ACCCCAGACC
GCGCCGTTCA CCCCTGCATC GTCCCCAGAA GCCGTCGACC CGCTGACGCC GCCGAGGAGC
AGCGCTCCCG AGACGGCACC GCACGCGTCC GAACCCGCAG TCTCCACGAC GCCGACCGTC
CCGTCAGCAC AGCCCCTCCG TGGAGCCCAG GGCGCCTTGG CACGCAACAT GGAGGCCTCG
CTTGCGGTCC CGACCGCCAC CAGCGTGCGT GCCGTGCCCA CCCGCGCACT CGAGGTCAAC
CGGGCAACCA TCAACGATCA GCTCCAGCGG CTCGGTCGAT CGAAGGTCTC GTTCGGTCAC
TTGGTCGCGT GGGCCATCGT CCGTGCGCTC GTCGAGCATC CTCGGATGCA CGCCTCCTAC
GTCGCCGACG CCGACGGACG CGGGCACCCC GGCATCGTCA TCCCAGAGAG CGTGAACCTG
GGCATCGCCG TCGACGTTCA GCGCCCCGAC GGCACCCGCT CGCTCCTCGT GCCGGTGATT
CGCAACGCCG ACACCCTCGG TCCTCTTGGG TTCTTCGCCG CCTACGACGA TGCGGTCCGC
GCGGTGCGCT CACAGCAGGC ATCGCCCGAC CTCTTCGTCG GGGCCACCGC CTCGATCACG
AACCCTGGGA CGATCGGCAC CGAGCACTCA ATCCCGCGTC TCATGCCCGG TCAAGGGGTG
ATCGTTGGCG TCGGGGCCAT CGCCTACCCC GCCGCATTCC AGGCTGCAGA CCCACGACTC
CTCGGCGAAC TCGGTGTCTC GCGGACGATC ACCCTCACCT CGACGTACGA CCATCGCATC
ATTCAAGGCG CCGAGTCTGG GCAGTTCCTC GCGACGATCG CCGCTCTCCT CGAAGGAGAA
CAGGACTTCT ACGACGAGAT CTTCTCGGCA CTCCAGGTTC CCTACCCGCC CATGCGGTGG
CAGGCCGACC ACACCAGCAT GCAGCCCGAC GCGACCGAGC GGCTCGCCAA GCAGGTCCAC
GTCCAGAGCC TGATCCACCA CTATCGGGTT CGTGGGCATC TGCTCGCGAC GCTCGATCCG
CTGGACCTGA CCCGTCCCAC CATGAGCCCC GAACTCGATC CGGCAACCTA CGGACTCACG
CTGTGGGATC TCTCCCGACC CTTCCTCGCT GAAGGGCTCG TCCCAGGGGG TCAGGCGTCC
CTCGAAACCA TCCTCCAGGT GCTGCGCGAT ACCTACTGCC AGACCATCGG CTACGAGTTC
ATGCACATCC AGAGCCCGGA CGAGAAGCTC TGGATCCAAC AACGGATCGA GGGCTCGCAC
CAAACCCTCA CGAAGGATGA CCAGCTCCGC ATCCTCGCAA CCTTGAACGA CGCCGAGGCG
TTCGAGAAGT TCCTGTCGAC GCGCTACATC GGCCAGAAGC GCTTCGGTCT GGAAGGTGGC
GAGTCTGCCA TCGTGTTCCT CCGGGAGGTC CTCGATCACG CCGCCGAGAC GGGGACACAC
GCAGCCGTCA TCGGCATGGC GCATCGCGGG CGCTTGAACG TGCTGGCGAA CATCGTCGGC
AAGTCCTATC GCACGATCTT CGCCGAGTTC GAAGGCAACC TCGACCCCTC GAGCGTGCAG
GGCTCGGGCG ACGTCAAGTA TCACAAGGGT TTCGAGGGAC ACTATCGCAC TGCGAGCGGC
AGCGAGCTGC CCGTCACGCT CGCATCCAAC CCCTCGCACC TCGAAGCGGT CGATCCCGTC
GTCGAAGGCA TGGTGCGCGC GCTCCAGGAT CAGCGTGGCA CGCTCTACGA GTTCGGTGTC
CTCGGGATCC TCGTCCACGG CGACGCTTCG TTCGCCGGCC AGGGCGTCGT CGCCGAGACG
CTCAACCTCT CGCAGCTGCC TGGCTACCGG ACTGGCGGCA CCGTCCACCT CGTCATCAAC
AACCAGGTCG GCTTCACCAC GAACCCATCG GAGGCGCGCT CTTCCTTCTA CGCCTCCGAC
ATCGCCAAGA CCATCCAAGC ACCCATCTTC CACGTCAACG GCGACGATCC GGAGGCGGTG
GCGCGCTGTG CGCGGCTCGC CGTCGAGTAT CGAGCGACCT TCCACAAGGA CGTCGTCGTC
GACCTGATCT GCTATCGCCG TCACGGACAC AACGAAGGCG ACGAACCGAG CTACACGCAG
CCCGTCATGT ACCACGTGAT CGAGCAGCAC CCGTCCGTGC GCCGACTCTA CGCAGATCAG
TTGGTACGTT CGGGTGCGAT CTCGGAGGAC GAAGCCGACC AAGCGCTCGA AGCGTACCTC
CAGCGGCTCG CGACGGCGCT TGCCGAGACT CGCGAGGCAG CACCCCCCAA GCCGACCGAG
CTGCCGCCAG AGCCAGCACG CGACGTCCCA CTCCCGATCG TCACGACCGC GGTCGACAAG
GCTGCGCTCG ACTACGTGAT CGAGACGATC CATCGGGTGC CAGAGGATTT TCACCTGCAT
CCAAAGCTCG CTCGCCAGTT CGAGACGCGC CGGGCCCTCT ACGAGCAGGG ACAGCTCGAC
TGGGCGCTCG GGGAGCTCGC TGCCTACGGC ACGCTGCTGC TCGAGGGGCA CGACGTCCGC
CTCAGCGGCC AAGACACGCG CCGCGGCACC TTCTCGCATC GTCACGCCGC CCTCTACGAC
TACGAGACGG GCGCGATGGT CCAACCCCTC GCTCGCTTGC GCGACGACGA GGTGCCGGTG
CCGCACGCGT CCCCGATCGG GCGCTTCATG GTGTACGACT CCTCGTTGTC CGAGTATGCG
GCGATGGGGT TCGAGTACGG CTACTCGCTC GTCCAGCGAT CCGCTCTCGT CATCTGGGAG
GCACAGTTCG GCGACTTCGC GAACGGCGCT CAGATCGTGA TCGACCAGTT CATCGCCGGA
GCGCTCGACA AATGGGACCA GCACTCGGGT CTCGTGCTCT ACTTGCCGCA CGGCTACGAA
GGACAGGGGC CAGAACACTC GTCCGCTCGG CTCGAGCGCT TCCTCGCGCT CGCTGCCGGA
CCCAACCTTG CGGTCGTCCA ACCGTCGACG GCCGCGCAGC TGTTCCACCT CGTGCGCGCC
CAGGTTGCGC GCACCCCACA GCGGCCGCTC GTCGTCCTCA CCCCCAAGTC TCTGCTCCGT
GCGCGTGAGA CGCGCTCTGC GATCGCCGCG TTCACTGACG GAGGTTTCCA GCCGGTTCTG
GCCGACCCGT TGGTCGACGA CGGCGAGCTC GAGCCGACCT CAGTGCGACG ACTGATCCTC
GCAAGCGGCA AGGTTGCCTA CGAGGCAATG GCCAAGCGAG CCAAGGGTGA GCTCGCCGCG
CCGACCGCCA TCGTGCGCGT CGACCAGCTC TACCCCTGGC CCCGTGAAGC ACTCGCCGCA
GCACTGGCGA CCTTCCCCAA CCTCGCCGAA CTGGTGTGGC TCCAAGAGGA GCCCGAGAAC
ATGGGCGCCT GGCCGTCCGT CCACGAGCTG CTCCATCGCA TGGACCTCAA TGGGGCGCGG
CTGCGCCACG TCTCTCGCGT GCGCGCTGGC TCTCCGGCAA CGGGCTCCGC TGCGATGCAC
GCGCTCGAAC AAGCCGACCT ACTTCGTCGC GCGCTCGAGG CACCCCTGCC CTAG
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| Protein sequence | MASAPDNSTV QHSASEQFGP NDWFVEEMAE RYRANPLLVP ESWRAYFEGE RVPDGVATKT
IATATAKELV GFEAPGVATP PTTATPAPTS PPHNGATPQT APFTPASSPE AVDPLTPPRS
SAPETAPHAS EPAVSTTPTV PSAQPLRGAQ GALARNMEAS LAVPTATSVR AVPTRALEVN
RATINDQLQR LGRSKVSFGH LVAWAIVRAL VEHPRMHASY VADADGRGHP GIVIPESVNL
GIAVDVQRPD GTRSLLVPVI RNADTLGPLG FFAAYDDAVR AVRSQQASPD LFVGATASIT
NPGTIGTEHS IPRLMPGQGV IVGVGAIAYP AAFQAADPRL LGELGVSRTI TLTSTYDHRI
IQGAESGQFL ATIAALLEGE QDFYDEIFSA LQVPYPPMRW QADHTSMQPD ATERLAKQVH
VQSLIHHYRV RGHLLATLDP LDLTRPTMSP ELDPATYGLT LWDLSRPFLA EGLVPGGQAS
LETILQVLRD TYCQTIGYEF MHIQSPDEKL WIQQRIEGSH QTLTKDDQLR ILATLNDAEA
FEKFLSTRYI GQKRFGLEGG ESAIVFLREV LDHAAETGTH AAVIGMAHRG RLNVLANIVG
KSYRTIFAEF EGNLDPSSVQ GSGDVKYHKG FEGHYRTASG SELPVTLASN PSHLEAVDPV
VEGMVRALQD QRGTLYEFGV LGILVHGDAS FAGQGVVAET LNLSQLPGYR TGGTVHLVIN
NQVGFTTNPS EARSSFYASD IAKTIQAPIF HVNGDDPEAV ARCARLAVEY RATFHKDVVV
DLICYRRHGH NEGDEPSYTQ PVMYHVIEQH PSVRRLYADQ LVRSGAISED EADQALEAYL
QRLATALAET REAAPPKPTE LPPEPARDVP LPIVTTAVDK AALDYVIETI HRVPEDFHLH
PKLARQFETR RALYEQGQLD WALGELAAYG TLLLEGHDVR LSGQDTRRGT FSHRHAALYD
YETGAMVQPL ARLRDDEVPV PHASPIGRFM VYDSSLSEYA AMGFEYGYSL VQRSALVIWE
AQFGDFANGA QIVIDQFIAG ALDKWDQHSG LVLYLPHGYE GQGPEHSSAR LERFLALAAG
PNLAVVQPST AAQLFHLVRA QVARTPQRPL VVLTPKSLLR ARETRSAIAA FTDGGFQPVL
ADPLVDDGEL EPTSVRRLIL ASGKVAYEAM AKRAKGELAA PTAIVRVDQL YPWPREALAA
ALATFPNLAE LVWLQEEPEN MGAWPSVHEL LHRMDLNGAR LRHVSRVRAG SPATGSAAMH
ALEQADLLRR ALEAPLP
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