Gene Afer_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1724 
Symbol 
ID8323815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1807813 
End bp1809018 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content67% 
IMG OID644952855 
Productprotein of unknown function DUF201 
Protein accessionYP_003110313 
Protein GI256372489 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGCC TTGCCCTCGT GGTCCCCGCG CATAGTTACC GAGGGAACGA TTTCCTCGCA 
GCTGCAACGC CACACCAGCT CACGATCGTC ACCGATGCCG AGGAGCCACT CGGAGGTGAC
CACATCGTGC GATCTTCGCT CTCCCTGGAT GCGTCCGAGA CAGATCGCCT CGCCCAGGTC
CTCGTCGAGC GCAGCGTCGA AGCGGTCATC GGCGTCGACG AGTACTCCGT CCAGCTCGCA
GCCGATGTCT CCGATCGCAT GGGACTCAGC CACGGCCGTG GGGAGGCAAT CCGGCGGGCG
ACACACAAGG ACCAACTGCG CAGCACCCTC GATCGCGCGG AACTGCCACA GCCATCGTGG
CACGTGGCCG ACAGCGTGGC CGCCATCGAC GTCGACTGGC TCGAGCGCGC GCTCGGGCCT
GGCCCGTGGG TGCTCAAGCC CCTCGACCGA ACCGCCTCCG AGGGAGTCGT GCGCGTCGAT
GCGTCCACAC TCGCCTGGGG ACGCGACCAA CTCGCAGCCG TCGTCGGATC GCACGCGCCG
GTCCTCGCCG AGACCTTCGT ACCGGGAGCC GAGATCGCCG TCGAGGCGAT CCTGACCGAC
GGCGCACTCG AGATCGTCAC GGTCTTCGAC AAGCCAGACA TCGGCGATGG ACCGACGTTC
TGGGAAGCGA CGTACCTCGC TCCGAGCTCC ATCCCTCTCT CAGTGATCGA AGAGGTTCGT
GTGCTCATCG AACGAGCTGC ACGCGCCCTC GACCTCCACA CGACGCCGAT CCACGCCGAG
TTACGGCTCC CTGAAGGTCG GCCGGTGATC ATCGAGCTCG CGCCACGCAC CATCGGCGGA
CGCTGTGCTC GAGCCATTCG TCTCGACGAC GGTCGTCATC TCGAGGATCT CGTCATCGAG
CGGGCACTCA ACCAGCCACG CACGATCCCT GCGGCCCGCC GTGGTGGCCC CATCGGTATC
TGGATGCTCC CCACGCCCCA CGACGGCACC TTCGAGGGTC TCGACGGCGT GGAAGTGGCG
GCAGCGATCC CAGGCGTCGA GCGCATCGAG ATGACCACGA CCGCCGGCAC CACGGTGTAC
GCTCCCCCAC GAACCCGCAG CTATCTCGGC TTCGTCTTCG TGAGCGGACG AAGCCGCCGA
CGCGTGCTCT CCACGCTCGA TCAGGTCCGT TCCGTGCTTC GTCCCCGTGT CGCTCCCGCT
TCCTAG
 
Protein sequence
MARLALVVPA HSYRGNDFLA AATPHQLTIV TDAEEPLGGD HIVRSSLSLD ASETDRLAQV 
LVERSVEAVI GVDEYSVQLA ADVSDRMGLS HGRGEAIRRA THKDQLRSTL DRAELPQPSW
HVADSVAAID VDWLERALGP GPWVLKPLDR TASEGVVRVD ASTLAWGRDQ LAAVVGSHAP
VLAETFVPGA EIAVEAILTD GALEIVTVFD KPDIGDGPTF WEATYLAPSS IPLSVIEEVR
VLIERAARAL DLHTTPIHAE LRLPEGRPVI IELAPRTIGG RCARAIRLDD GRHLEDLVIE
RALNQPRTIP AARRGGPIGI WMLPTPHDGT FEGLDGVEVA AAIPGVERIE MTTTAGTTVY
APPRTRSYLG FVFVSGRSRR RVLSTLDQVR SVLRPRVAPA S