Gene Afer_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1723 
Symbol 
ID8323814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1807159 
End bp1807773 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID644952854 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_003110312 
Protein GI256372488 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACTGA TGGCTGTGTC GCAGCGTGCA GCGGAGGTCG TCGCTGCGGC GATCGCCGAA 
GAGCAAGCGG AGGCGCCGAT CGCGCTCTGG ATCGAGGTGA CTGGTTCGAC GGGCGACCAG 
TGGACCTACG ACGTGTACCT GCAGGAGCTG GCGATGGCGT CCGGTGCAGA CGCCATCGTC 
GAGGTGGGCG ATCTCGTTGT CGTCATTCCT GCGGCGTCGA TCGAGGCGCT GCGCGACGCG 
ACGCTCGACG TCGGCGACGA TGGCGACCTC GTCATTGAAA ATCCGAACGC CCCGACGCGC 
CAGAGCGATC TACCAGAGTT CGGTCCCGAG GCGCTCACGA GCGATCTCGC CCGACGTGTC 
GACAGCATCC TGCAGGAGCA GGTCAACCCG GCCATCGCAG CTCACGGTGG GTATGCGGAA 
CTCGTCGGCG TCGTCGACGA GGTGGCCTAC GTGTTGATGG GTGGTGGATG CCAGGGGTGT 
GGACTGGCTT CTGCGACCCT GACGCAGGGC ATCGCGGTCG CCATTCGAGA TGCCGTACCC 
GAGATTCGTG ACGTCGTCGA CGTGACGAAT CACGCCGCCG GCAACAACCC GTACTACCAA 
CCTGAGAAGA AGTAG
 
Protein sequence
MGLMAVSQRA AEVVAAAIAE EQAEAPIALW IEVTGSTGDQ WTYDVYLQEL AMASGADAIV 
EVGDLVVVIP AASIEALRDA TLDVGDDGDL VIENPNAPTR QSDLPEFGPE ALTSDLARRV 
DSILQEQVNP AIAAHGGYAE LVGVVDEVAY VLMGGGCQGC GLASATLTQG IAVAIRDAVP 
EIRDVVDVTN HAAGNNPYYQ PEKK