Gene Afer_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1721 
Symbol 
ID8323812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1805910 
End bp1806392 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content69% 
IMG OID644952852 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003110310 
Protein GI256372486 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.410028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAG TATCGCCGTC GACGCCTGTC CGAACAGCCC AGCACCCCCT GACCCGGGAG 
GTGTTCGGCA CGCTGCTCGT TCTCCAGGGC CGGCTCGTCG ACCTGCTCGA TCGTGAGCTC 
GAGAGCGCGT GCGGCATCGG TCTCGGGGAG TTCTTGGTGC TCCACCACCT CGACAGCGCT 
CCCGAGGGAC GGGTTCGCCT GTCCGAGCTC GCCGATGCTG CCTTGGTGTC GCGCAGCGCG 
CTGTCGCGGC GAGTCGACCG GCTGGTCGAA GCCGAGTGGG TCGTGCGGCG TGGCTGCCCG 
ACCGATCGGC GCGGGACGTA TGCGGTGATC ACGGAGGCGG GACGCACGGT GGCGCGCCGA 
GCCGAGCCCG TTGTGGTCGC GACGCTTGAC GGCGCGCTTG GCAGTCGACT GACTCCGGAG 
GAATTGCGCC AGCTTGGCAA CCTGCTCGCC AAGGCCCTTG AAGGGGTCGA CGCGAGCGAC 
TGA
 
Protein sequence
MQAVSPSTPV RTAQHPLTRE VFGTLLVLQG RLVDLLDREL ESACGIGLGE FLVLHHLDSA 
PEGRVRLSEL ADAALVSRSA LSRRVDRLVE AEWVVRRGCP TDRRGTYAVI TEAGRTVARR 
AEPVVVATLD GALGSRLTPE ELRQLGNLLA KALEGVDASD