Gene Afer_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1714 
Symbol 
ID8323805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1800471 
End bp1800908 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content68% 
IMG OID644952845 
ProductNusB antitermination factor 
Protein accessionYP_003110303 
Protein GI256372479 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGACC GACGCGACGA CTCGCACGAC GTGCGCGCCG TTTGGCGCGA GCGCGTGCTG 
GAGCTGCTCT ACGAAGCCGA TACGAAGGGC GAAGCGCCCG CGGACCTCCT TCGGGGGGAC
GAGCCAGCGT TCATCCGCGA ACGGATCCGA GGTCTGACGG AGCGACGCAG CGAGATCGAC
GCACAGTTGA CGGCCCACGT CATCGGATGG CAGCTCGAGC GGCTCGCACC CATCGACCGT
GCCATTCTCC GACTGGCGAC CGCAGAGCTC CTGGAAGCAT CGACGCCGCC CTCTGTCGCC
ATTGCAGAAG CGGTGAAACT CGCCGACCGC TATTCAACCG AACGTTCGGC CGCGTTCGTC
AATGGGGTCC TCGCCTCGAT CGCCGTCGAC ATCGCTGGCG AGGGCCACCG CGGCGAGCCC
GACCGCGAAC CCAGCTAG
 
Protein sequence
MPDRRDDSHD VRAVWRERVL ELLYEADTKG EAPADLLRGD EPAFIRERIR GLTERRSEID 
AQLTAHVIGW QLERLAPIDR AILRLATAEL LEASTPPSVA IAEAVKLADR YSTERSAAFV
NGVLASIAVD IAGEGHRGEP DREPS