| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1698 |
|---|
| Symbol | |
|---|
| ID | 8323789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1783187 |
|---|
| End bp | 1784116 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952829 |
|---|
| Product | dihydroorotate dehydrogenase family protein |
|---|
| Protein accession | YP_003110287 |
|---|
| Protein GI | 256372463 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGACC TCTCGGTTGC ACGCGGTCGG CTCGTCTTGG CGAACCCCAT CCTCACGGCG
GCCGGGTGTG GCGGTTACGG CACGGAGCTC GCGGCTGCTG TGGCTCTGGA GCGACTCGGT
GCCCACGTCG TCAAGTCGCT GACGACCGTT GCCACCGAGG GCAATCCAGC GCCTCGCCTC
GCTCCGGTAC CGGGTGGCAT GGTGAACTCG GTCGGGTTGG CGGGTCCAGG CATCGACCGA
TGGCTGGCTG AGACGTGGCC CTCCTTGGCC GACGCCAGGA TCCCGGTCGC CCTCAGCGTC
TGGGGACGTC AGCCGCGCGA CTACGGGGAG ACCGTTCGGC GCGCTGCTCG GATCGCGCCA
TCGCTGGTCT ACATCGAACT CAACCTGTCG TGCCCGAATC TCGAGGCCGA CCGGGCGTTG
TTCGCGCACG ATCCCAACGC CACCGCTCGC GTGGTGGGCG CGGTGCGCGA CGAGGTTGCG
ACCCCGATCC TCGTGAAGCT CTCGGCGAAT ACGGATCGCA TCGTCGACGT GGCGCACGCC
GCGGTGGCTG CCGGCGCCGA CGGACTCGTC GCGATCAACA CCCTCTTTGC GCAGTGGTAC
GACGACGGTC GTGAGGCCCT CGGCACGGCG CGAGGGGGCG GCTTGTCGGG CCGCGCTGTG
CAGCCGATCG CGCTTCGGGC GGTCGCAGAT CTGCGTGCGG CGTTGCCGAC CGTCCCGATC
ATCGGCGTCG GCGGGGTCGC GACCGCCGAC GACGTCGAGC GCTTCGTTCG TGCTGGAGCC
GATGCCGTCC AGATCGGCAC CGCGCTCTTT GTCGACCCAC GACGTCCCGT CCTCGTGCTC
GCCGAGATCG AACGTCGGCT CGCGCGCAGC GGCGTCGACA GCTGGGACCG CTACGCAAGG
GCGCTTCGGC GTCAAGGAGG GAGTGGATGA
|
|---|
| Protein sequence | MADLSVARGR LVLANPILTA AGCGGYGTEL AAAVALERLG AHVVKSLTTV ATEGNPAPRL
APVPGGMVNS VGLAGPGIDR WLAETWPSLA DARIPVALSV WGRQPRDYGE TVRRAARIAP
SLVYIELNLS CPNLEADRAL FAHDPNATAR VVGAVRDEVA TPILVKLSAN TDRIVDVAHA
AVAAGADGLV AINTLFAQWY DDGREALGTA RGGGLSGRAV QPIALRAVAD LRAALPTVPI
IGVGGVATAD DVERFVRAGA DAVQIGTALF VDPRRPVLVL AEIERRLARS GVDSWDRYAR
ALRRQGGSG
|
|---|
| |