Gene Afer_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1682 
Symbol 
ID8323773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1768708 
End bp1769196 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID644952813 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003110271 
Protein GI256372447 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.120185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG AAGGCCGACC ACGTGCCGAG CCCACTGACC GCTTCGTCAT CGTCGCGGCG 
CGCTTCAACG AGCTGGTCGG CGAGGCGCTG GTGGATGGGG CTCGGCGGGC GCTCGAGGAG 
GCAGGTGCGG CTGAGCCCAT CGTCGTGTGG GTTCCCGGAG CGCTCGAGAT CGCTGGCGCG 
GCGCGTCGAC TCGTGACGGC AGGCACGCCG ATCGCGGGCA TCATCGCCGT CGGCGCGGTC 
ATTCGTGGCG AGACCGATCA CTACGAGGTC GTCGCGACGC AGGCGAGCGC CCAGCTGGCT 
CGTCTCGCGG CCGAGGCCAC GGTGCCGGTG GCCAATGCAC TCCTCACAGT GGACTCCTTG 
GAGCAGGCCT TCGATCGGGC CGGGGCCAAG CACGGCAACA AGGGCTACGA GGCAGCCCTC 
GTGGCCGTTC GCATGGCCGA TGTCTATCGA CGCATCGATG CACTCAAGGA GGATGACGGT 
TCGTGCTGA
 
Protein sequence
MKLEGRPRAE PTDRFVIVAA RFNELVGEAL VDGARRALEE AGAAEPIVVW VPGALEIAGA 
ARRLVTAGTP IAGIIAVGAV IRGETDHYEV VATQASAQLA RLAAEATVPV ANALLTVDSL 
EQAFDRAGAK HGNKGYEAAL VAVRMADVYR RIDALKEDDG SC