Gene Afer_1678 details

Gene Information

• Locus tag: Afer_1678
• ID: 8323769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidimicrobium ferrooxidans DSM 10331
• Kingdom: Bacteria
• Replicon accession: NC_013124
• Strand: -
• Start bp: 1766488
• End bp: 1767000
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644952809
• Product: translation initiation factor IF-3
• Protein accession: YP_003110267
• Protein GI: 256372443
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0127847
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATGATC AGATCCGAGT TCGCGAGGTG CGCCTCGTCG GACCGGACGG CAACCAGCTC 
GGCATCAAGC CGACTCCGGA GGCACTGCAA ATCGCCCGAG CGATGGACAT GGACCTCGTC 
GAGGTGGCAC CCATGGCCAA GCCACCGGTC GCGAAGATCA TGGACTACGG GAAGTTCAAG 
TTCGACCAAG CCCAGCGAGT CCGTGAGCAG AAGCGCAAGG CCTCGGCGTC GCAGCTCAAG 
GAGATGAAGT ACCGCCCCAA GATCTCGCAG GGCGACTTCG ACACGAAGAC GCGACAGGTG 
GCCAAGTTTC TCGCCGAGGG CCACAAGGTG AAGGTCACGA TCATGTTCCG CGGTCGTGAG 
GTGTTCCACC CGGAACTCGG TCAGGAGATC CTCACGAGAG TCGTCGAGGC GGTCAAGGGC 
GTCGCTCACG TCGAGGTGAT GCCGAAGCTG GATGGCCGGA ACATGGTGAT GGTGCTCGCA 
CCAGATCGCC GACCCGCACC GGCGCGCGCC TGA 

 

Protein sequence

MNDQIRVREV RLVGPDGNQL GIKPTPEALQ IARAMDMDLV EVAPMAKPPV AKIMDYGKFK 
FDQAQRVREQ KRKASASQLK EMKYRPKISQ GDFDTKTRQV AKFLAEGHKV KVTIMFRGRE 
VFHPELGQEI LTRVVEAVKG VAHVEVMPKL DGRNMVMVLA PDRRPAPARA