Gene Afer_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1672 
Symbol 
ID8323763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1760563 
End bp1761408 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID644952803 
Productprotein of unknown function DUF81 
Protein accessionYP_003110261 
Protein GI256372437 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTCA TCACACCGCT CGTCTTCATC ATCGCGCTGA TAGTGATCGC CGCTGTGGCT 
GGCCTGCTCG GGTCCCTGGT GGGACTCGGT GGCGGAATCG TCGTCGTGCC GGTGCTCACC
CTGGTCTTCC ATGTCGACAT CCGCCTGGCG GTCGGGGCGA GCCTCGTGAC CGTGGTGGCG
ACCTCGGCGA CCGGCGCGTC GCGGCTCGTC CGTCGCGGCA TGGTGAACGT GCGTCTCGCG
CTGTATCTCG CGATCGCGAC CACGCTCGGC GCGATCGTCG GTGCCCTCCT GTCGCGCGCG
GTGCCGACGC GGTTCCTCTT CTTGCTGTTC GCAGCCATCC TCGTCTACTC TGCCGTCGCC
ATGCTGCGTC GACGCAGTGG GGATCGCATC GAGCAGCCCC GCGACGATCG CATCGCCGAT
GCCCTCCAAC TCCATGGCGC AGCGCCGATC GGTGATGGCG GCGTCCTCGT TGCCCATCGG
GTGGAGCGCA GCCTCCTCGG TCTGGTGCTG ATGTTCGGTG CCGGCGTGGT CTCGGCGCTC
CTCGGTATCG GCTCTGGTGC GTTGAACGTT CCGACGATGG ACATGTTGAT GGGCGTGCCG
CTCAAGGTGG CCTCGGCGAC CAGCAGCTTC ATGATCGGCA TGACAGCCGC GGCGAGTGCG
GCGATCTACC TGTCGCGAGG CCAGATCGAC CCCATCCTCG CCGGCCCCAT CGCGGTCGGT
GTGCTCGGTG GCGCAACGCT CGGGGCTCGC CTGCTCACGC GGGTGAACGT GACCGTGGTG
CGCTGGGTCT TCATCGCGGT GCTCGTGGTC GTCGCCGTCG AGATGTTGCA GAAGGGCATC
GGATGA
 
Protein sequence
MMVITPLVFI IALIVIAAVA GLLGSLVGLG GGIVVVPVLT LVFHVDIRLA VGASLVTVVA 
TSATGASRLV RRGMVNVRLA LYLAIATTLG AIVGALLSRA VPTRFLFLLF AAILVYSAVA
MLRRRSGDRI EQPRDDRIAD ALQLHGAAPI GDGGVLVAHR VERSLLGLVL MFGAGVVSAL
LGIGSGALNV PTMDMLMGVP LKVASATSSF MIGMTAAASA AIYLSRGQID PILAGPIAVG
VLGGATLGAR LLTRVNVTVV RWVFIAVLVV VAVEMLQKGI G