Gene Afer_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1662 
Symbol 
ID8323753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1749927 
End bp1751093 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content73% 
IMG OID644952793 
Productaminotransferase class-III 
Protein accessionYP_003110251 
Protein GI256372427 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.314009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGGC TCGGGCTCAT CGGCGTCTAC GGGCAGCCCA AGCGGCGGTT CGTCCGTGGC 
GAGGGCTCCT GGCTCATCGA CGCCGACGGC CAGCGCTACG TGGACCTGCT TGCCGGCATC
GCCGTGGTGT CGCTCGGTCA CGCGAACCCG CGTCTCGTCG AGGCCCTCGG GGCCCAAGCT
GCGCGTCTGT GGCACGCGTC GAACTACTTC GACACTGACG CGCGCGAGCG CGCGCTCGCC
GCGCTCCAGA CGCCGCTCGC CTCGCTCGGG GACGCGTCGG TGTTCTTCGC CAACTCGGGG
ACCGAGGCGG TCGAGGGGGC GTTCAAGCTC GTCCGGCGTG CGCGCGCTCC GAGGACCCGC
GTGGTCGCGA TGACCGGCGC GTTCCACGGG CGTACCTTCG GCTCGCTCTC GCTGACAGGT
CAGCCCGACA AGCAAGCGCC GTTCGAGCCG CTGGTGCCCG ACGTCGTGCA CGTGGATCCG
CACGACACGG CTGCGCTCGA GGCGCAGGTC GCCGACGAGG CGACGGCAGC CGTGGTCGTC
GAGCCGATCG CGGGAGAGGC CGGCGTCCAT CCGCTGCCAG CGGCGGCGAT CGCGGCGATC
GAGCGGGCAC GGCGGGTCTC CGGCGCGCTC GTCGTCGTGG ACGAGGTCCA GACGGGCCTC
GGCCGTACGG GTGCGTGGCT CGGTTCGGAG GTGGTCGGGC TCGAGCCCGA TGTGATCACG
CTGGCCAAGG CACTCGGCAA CGGGTACCCG GTCGGGGCGG TCGTGGCCCG TGCGCCGGTC
GCCGAGGCGC TACGCCCGGG AGACCACGGC TCTACTTTCG GCGGTAATGC CCTCGCGATG
GCGGTCGTCG AGGCGGTGGC GAACGAGCTG GTTCGCCTTG ACGCGCCCGC GCTTGCTCGC
GCGCGAGGTG ACGAGGCCGT CGCGTTGGCG GGGGCGCTGC CTGGGGTACG GCTCGTCGAG
GGCTCTGGCC TGATGTTGGG CCTCGAACTC GCCGCTCCGG TCGCAGCGCG CGTCGTCGAC
GTGGCGCTCG CAGAGGGCGT CGTGGTGAAC GCCACCGGTC CGACGCGGTT GCGGCTGCTG
CCGCCGCTCA TCATCACGGC CGACGAGCTT GCGGAGGGGT TTGCCCGCCT CGGTCGTGCC
CTGGCCCGTG TCCTGGAGGA GGTCTGA
 
Protein sequence
MTRLGLIGVY GQPKRRFVRG EGSWLIDADG QRYVDLLAGI AVVSLGHANP RLVEALGAQA 
ARLWHASNYF DTDARERALA ALQTPLASLG DASVFFANSG TEAVEGAFKL VRRARAPRTR
VVAMTGAFHG RTFGSLSLTG QPDKQAPFEP LVPDVVHVDP HDTAALEAQV ADEATAAVVV
EPIAGEAGVH PLPAAAIAAI ERARRVSGAL VVVDEVQTGL GRTGAWLGSE VVGLEPDVIT
LAKALGNGYP VGAVVARAPV AEALRPGDHG STFGGNALAM AVVEAVANEL VRLDAPALAR
ARGDEAVALA GALPGVRLVE GSGLMLGLEL AAPVAARVVD VALAEGVVVN ATGPTRLRLL
PPLIITADEL AEGFARLGRA LARVLEEV