| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1633 |
|---|
| Symbol | |
|---|
| ID | 8323724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1722615 |
|---|
| End bp | 1723199 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644952765 |
|---|
| Product | uncharacterized peroxidase-related enzyme |
|---|
| Protein accession | YP_003110223 |
|---|
| Protein GI | 256372399 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TACCAGAGTG GTTCGGCCGC CTGGACCCCG ACCCCAACGC GCCCGACGAT
GTCCGCGCGC GCAACGACGC CGTCGCCGAA CGGACCGGCT TTCTCCCGAC GATCTTTGGC
GCCCTCTCGT GGCGGCCGGA GGAGTATCGA GCCTTCTTCG GCTACCACGA TGCGCTCATG
GAGGTCCCGA GCGGTCTCAC GAAGGCTGAG CGCGAGCTCA TCGTGGTCGC GACGTCGGCG
GGCAACCACT GCCTCTACTG CGTCATCGCT CACGGCGCCA TTCTTCGTAT TCGGGCACAC
GACCCCACCA TCGCCGACCG GGTCGTCGTC GATCCAGAGC GCGCAGACCT CGACGAACGA
TCACTCGCCA TCGTGCGCTT TGCCTTCAAG GTGCGCGACG AAGCCAACGC GATCACGCCC
GAGGACTTCG CGCCGCTCTA CGAGGTTGGG CTCGATGACA CCGACATCTG GCTCGTTGGG
GCGATCACCG CGTTCTTCGC TCTCTCCAAT CGTCTCGCCG GCTTCGCGAA GATCCTCCCG
AATTCCGAGT TCTATGCCAT GGGACGTACG CCGCGAAGCT CATAG
|
|---|
| Protein sequence | MTRIPEWFGR LDPDPNAPDD VRARNDAVAE RTGFLPTIFG ALSWRPEEYR AFFGYHDALM
EVPSGLTKAE RELIVVATSA GNHCLYCVIA HGAILRIRAH DPTIADRVVV DPERADLDER
SLAIVRFAFK VRDEANAITP EDFAPLYEVG LDDTDIWLVG AITAFFALSN RLAGFAKILP
NSEFYAMGRT PRSS
|
|---|
| |