| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1631 |
|---|
| Symbol | |
|---|
| ID | 8323722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1719747 |
|---|
| End bp | 1721699 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 650 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644952763 |
|---|
| Product | protein of unknown function DUF255 |
|---|
| Protein accession | YP_003110221 |
|---|
| Protein GI | 256372397 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGAATC GCCTTGCCAC CAGCGACAGC CTGTATCTGC GCGATCATGC CGACGATCCG
GTCGACTGGT GGCCCTGGTC GAGCGACTCG CTGGCGACAG CTGCTCGGCT CGGTCGGCCG
CTGTTCGTGT CGATCGGCTA CGCCGCATGC CACTGGTGTC ACGTCATGGC CGAGACCACG
TTCCGCGATC CCGCGGTCGC AGCGCTCATC AACGAGCACT TCCTCCCCGT GAAGGTCGAC
CGTGAGGAGC TCCCCGACAT CGATGCTCGC TTCATGGCGG CCGCGCTCGC GATCAACGGC
AGCGGTGGAT GGCCGCTCAC CGCCGTTGCC ACGTCGGATG GGAGACCTGC CTGGGTCGCG
ACCTACCTCC CGCCACGCTC GACGAGTAAC CTGCCCGGCC TGATCGAGAC GCTCACCACG
ATCCTGGACG CGATCGCACG CGACCCCCGC GCGCTCGAGC GTGCTGCCGA CGAACTCACG
CGCGCACGCC TCGAGCCTCG CAGTCGGCGA CCAACTGCGC CACCGACCGA CGAGATCACG
ATGCGCCTGC GGACGGACCT CGCACGTCAG CTCGATCGGT CCGAGGGTGG CTTCGGAACG
GCACCGAAGT TCCCACAGGC TCACGCACTC CTCGCCCTCT GGGAGCTCGT GCGCACCGGG
GATGGCGTCG AGACAGTCCG CGTGCGAGAG CTCGTCCTCG CGAGCGTGCG CCGCTACGCC
GAGAGCGGTC TCGTCGACCA CCTCGACGGA GGCATCTTTC GCTACGCCGT CGATCGCCCG
ATGGTGGACG TGCACTACGA GAAGATGCTC GTCGACCAAG CCTGGTTCAT CCTGCTCCTC
GCGGTGATCG GTCCCGATCG CGAGGATCTC GACCTGTACT TCACGCTCGA GCGCACGATC
GCCTTCGTTC GACGAGCGCT CGTACGCTTC GACGGCCTGC TCGCAACCTC GCTCGACGCC
GACGCCCACG GAGTGGAAGG GGGCGCCTAC CTCCTGCGCG CCGAGGAGGT CCGTGCCGTG
CTCGGCGACG AGGCCGCCTG GGTAATCGAC GAGCTTCACC TACCTCCCGA TCGCCCCCAC
CACGGCCACC GGATCGGCGC TTCGACGCTC CGATTGGAAG GGAACGCACT CACCCGCTTC
GATGCGCTCG CCGCATGGCG GCGCGGGCGC GGCAGTGCGC GACGCGACGA CAAGGCCTTG
TGCGACCACA ACGCCGCCGT CGCGACCGCA CTCCTCGTCG CCGGTCGGCG CTCGGGACGC
GACGAGTGGA TCGTCTGGGG TCTCGGCCTC GCGCGTCGCG TGCATGCGAC GTTCGTCGAT
GCGAGCGGCG CCCGTCACGT CGCCTACGGC GGCGAGGCCC GCGGAGCAAC GAGCTCCGAC
GAGCTGTGGG TCTCGATCAT GGCCCTCGCC GCATGGGAGG TCACGGGCGC GACTGCTTGG
CTCGAGCGCG CGCGCACGAG CGCCAGTCGC CTCGTCGAAC GGTTCCTCCT CCCAGGGCTC
GGCATGGTCG TCTCGAGCAC GGAGCCTGGT GAGGCCGTCC CCGACCGCCT CGACGGCGCC
CACCCGTCCG TGAGCTCACT CGCCCTGTGG CACCTCACGC GGCTCGTCGC GGTGAGCGCG
GACGACCGCC TCGCCCACGC ACGCAGCCAG CTCGCCGATG CGCTCGCCGA TGTCCTGGAG
GCCGCGCCGG CCGCAGCTGC CCTCGGCGCC CTGGCGATGG GACACACCGA CCGCGTGCGC
ACCGTCGTCG TCGCGACCCC CAACCTCACC GAACTCGCCC GTGTCGCCCT CGCCGCTGCT
CGTCCGCTCG ACGTCGTCGT CCGCGATCCG ACCCACCCAC TCGCGACCGG AGCGGCTGGC
GACCGGGCCG AGGTGTGTGT TGCTCACGCC TGCCTGCTCC CGACGAGCGA TCCACGCGTC
CTGGCTGACG CGCTCTGGTC CACGCTCCCG TGA
|
|---|
| Protein sequence | MGNRLATSDS LYLRDHADDP VDWWPWSSDS LATAARLGRP LFVSIGYAAC HWCHVMAETT
FRDPAVAALI NEHFLPVKVD REELPDIDAR FMAAALAING SGGWPLTAVA TSDGRPAWVA
TYLPPRSTSN LPGLIETLTT ILDAIARDPR ALERAADELT RARLEPRSRR PTAPPTDEIT
MRLRTDLARQ LDRSEGGFGT APKFPQAHAL LALWELVRTG DGVETVRVRE LVLASVRRYA
ESGLVDHLDG GIFRYAVDRP MVDVHYEKML VDQAWFILLL AVIGPDREDL DLYFTLERTI
AFVRRALVRF DGLLATSLDA DAHGVEGGAY LLRAEEVRAV LGDEAAWVID ELHLPPDRPH
HGHRIGASTL RLEGNALTRF DALAAWRRGR GSARRDDKAL CDHNAAVATA LLVAGRRSGR
DEWIVWGLGL ARRVHATFVD ASGARHVAYG GEARGATSSD ELWVSIMALA AWEVTGATAW
LERARTSASR LVERFLLPGL GMVVSSTEPG EAVPDRLDGA HPSVSSLALW HLTRLVAVSA
DDRLAHARSQ LADALADVLE AAPAAAALGA LAMGHTDRVR TVVVATPNLT ELARVALAAA
RPLDVVVRDP THPLATGAAG DRAEVCVAHA CLLPTSDPRV LADALWSTLP
|
|---|
| |