| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1615 |
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| Symbol | |
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| ID | 8323706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1706030 |
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| End bp | 1707220 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952752 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_003110210 |
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| Protein GI | 256372386 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.47386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGACG GGCGGGTCGT GCTGATGGCG CTGAGTGCGT CGGTCGTGAG CGATGACGAG
CCCGTCTGGC TCGATCGACA GTCGGACCTC GACGAACTCG TCGGCGTCGG GCTCGGGGTG
CCACGCATCG CGATCGACAC TGAGTTCCAT CGGGAGCGGA CGTACTATCC ACGCCTCGCG
TTGGTGCAGG TCGCGATCGA TCGGAGGGTG TGGTTGATCG ATCCGCTGCG GGTCGATCTC
TCGCCGATCG CAGCGTGGTT CGACGAGGTG GAGCTCGTAT TTCACGCTGC CGATCAGGAC
CTCGAGATCA TCGAGCGCGC GGTCGGCGCA CGCCCACGGC GTATCTTCGA CACCCAGGTC
GCAGGTGGAT TCCTCGGGGC CGGTCACGCG AGTCTCGGCG CGTTGCTCGA TCGCTACCTC
GGCGTGAGCA TCTCCAAGGC TGAGCGCACC TCGGATTGGC TGCGTCGTCC TCTCGAGCCC
GGGCAACTCG CCTACGCCGC GAACGACGTC CGCTACCTCG CTGCGCTCGC CGACCGGCTT
CTCGAGGAAC TGCACGCTCG TGGACGAGAG GACTGGGCTC GCTCAGAGAT GGCTCGTCTC
GTGGAGCGGC GGCGTCGGGA CATCGAACCG GAGCTCGCAT GGACACGGAT CCGGGAGTGT
CGTGGCCTCG ATCCTACGGG GAGACGGATC GCAGCGAGCG TGGCGGCCTG GCGCGAGCGC
ACCGCCCAAC GCGACGACGT TCCGGTGCGC ACGGTGCTCT CGGATCTCGC CGTGGCGAGT
GTCGCCAAGG CGCGTCCGAG CTCGCTCACC GAGCTGCGCA GCGTGCGGGG CTTCGACGGC
CGCATGGCGA AGGAACGTGC TCGTGAGCTA CTCGAGGTCG TACGAGCTGC GCGTGACGAC
GATGCCATCG TGGCTCGGGG CGCCGTGCGT ATGGATCGCG CGCTCGATCC CCACGAGGTG
CCGCTCGTGC TCACGGCACA AGCGCTCGTC CATGCAGTGG CGCTGGAGCT CGAACTCGAG
CCCTCGTTGC TCGGTTCGCG TGAAGAGGTG GAGCTCTTCG TGTCTCGGGG CGAGGGGAGC
CTGCTCGAAG GGTGGCGCTA CGACGTCGTG GGACGTGGGA TCCAGGCCAT CCTCGCGGGA
GAGCGCCGCA TCGAGGTGCA TCAAGGACGG CTGCGTCAGA TCGATCGCTG A
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| Protein sequence | MGDGRVVLMA LSASVVSDDE PVWLDRQSDL DELVGVGLGV PRIAIDTEFH RERTYYPRLA
LVQVAIDRRV WLIDPLRVDL SPIAAWFDEV ELVFHAADQD LEIIERAVGA RPRRIFDTQV
AGGFLGAGHA SLGALLDRYL GVSISKAERT SDWLRRPLEP GQLAYAANDV RYLAALADRL
LEELHARGRE DWARSEMARL VERRRRDIEP ELAWTRIREC RGLDPTGRRI AASVAAWRER
TAQRDDVPVR TVLSDLAVAS VAKARPSSLT ELRSVRGFDG RMAKERAREL LEVVRAARDD
DAIVARGAVR MDRALDPHEV PLVLTAQALV HAVALELELE PSLLGSREEV ELFVSRGEGS
LLEGWRYDVV GRGIQAILAG ERRIEVHQGR LRQIDR
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