| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1611 |
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| Symbol | |
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| ID | 8323702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1699682 |
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| End bp | 1702843 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952748 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003110206 |
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| Protein GI | 256372382 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGCTC GAGGGGAGCT ACGAGTGAGC GAGGCGGTCG TCGAACTCCA TGCCCATTCG
TCGTTCAGCT TCCTCGACGG CGTCGTCGAT CCAGAGGATC TCGTCGAGGC CGCGGCGGTC
GCGGGTTACC GTGCGCTCGC GCTGACCGAT CACAACGGTC TCTACGGAGT ACCCCGCTTC
CTCGAGGCGG CTCGCCGTGT GGGGGTCGTC CCACTCGTCG GTGCCGAACT TACGTTGGCG
ACGACGACGC CTCGAGCTGG CGCGACCGAC CCGGAAGGGG AGCACCTCGT GGTCCTCGCA
GCCTCGCCAG AGGGCTATCG AGCGCTGTCG CGTGTCATCG CGACCGGTCA CATGCGTACC
GGCGAGAAGG GACGCTTCGA TCTCACGATC GACGACCTCG CTGAGGCGGC CCCATCAGGT
GGGTGGTTCG TGCTCGCGGG GTGGCGCAAG AGCCCTCCGG GGCGTGCGCT CGCGCACGCT
GGGCCGAGCG CCGCGGAGCG CAGTGTGCGC TCGCTGTGGG AGCGCTTCGG CGATGCGTTG
GTGTTGGAAC TCGTCGACAC CCTCGACCCT GCCGACACGG TCCGCAACGA CGTCCTCGCG
GCGATCGGTG CGCACCACGG CCTGCCGGTG GTGGCGACCC AGGCTGTGCA CGCGATCGAC
GTGCGAACCC AGCGAGCCGC CGTAGTTGCC GCTGCGATCC GTGCACGGCG CACCCTCGGA
GAGCTCGATG GCTACCTCCC AGGCGCAGGG CCGCCGGTGC TGCGGCCAGC GCGCGCGTTG
CGAGCGCGGT TCGGCCGCTA TCCCGGCGTG GTCGACGCCG CCGTCGAGCT GGCCGCTCGG
TGCGCCTTCA ACGTCGATCT GGTGGCCCCT GGCCTGCCTC GTGACGTCGT CGCGATGGGC
GTCGACGATG ACGAGGCCCT CGTCGCGCTC GTGGCCGAGC GGGCACCGAG GCGCTACGGT
CCGAGAGCTG CGCCGCGGAT CCCCGGTGCG TGGGAGCAGA TCGACCACGA GCTCGACGTG
ATCCGCTCGC TCGGTTTTGC CGGCTACTTC CTCGTCGTCA CTGACATCGT GGACTTTTGC
GTGCGAGAGG GCATCTACTG CCAAGGGCGC GGCTCGGCGG CGAACTCGGC GGTGTGCTAC
GCACTCGGGA TCACGAACGT CGATCCGGTG GCGCTCGGTC TGCTCTTCGA GCGGTTCCTC
TCGCCCGAGC GAGACGGTCC TCCCGACATC GACGTCGACA TCGAGAGCCG TCGTCGTGAA
GAGGTCATCC AGTACGTCTA TACCCGCTAT GGACGAGCGC GTGCGGCGCA GGTCGCCAGC
GTGATCACGT ACCGTGCTCG GTCGGCACTG CGCGACAGCG CGCGGGTCTT CGGTGTCGAC
CAGGCCACGC TCGCGGCGTG GTCGAAGGGG GTCGAGCACC GAGGTTCGGT CGCGCGCTCA
CTCGCGGAAC GTGACGGCGC GGGTCGCCCG TTGCTCGAGG TCCCTGCGGT GATTGCTGAG
GTGGCGAGCG TCCTCGAGGG CGCTCCTCGG CACCTCGGGG TCCACGTGGG CGGGATGGTC
CTGTGTGATC GCCCCATCGT GGACGTGTGT CCGACGGAAT GGGCACGGGC CGAGGGTCGC
AGCGTGCTCC AGTGGGACAA GGATGACTGC GCGCGCATGG GTCTCGTGAA GTTCGATCTC
CTCGGGTTGG GCATGCTCGA GGCGATCCAC GAGATGGTCG ATCTCGTGCG CGAGCGCGTC
GGCGTCGAGG TCGACATCGC CACGCTGGAA CAGGATCCGG CGGTCTACGA GATGCTTGCT
CGTGCTGACT CGGTGGGTGT GTTCCAGGTC GAGTCGCGTG CGCAGATGGC GACACTCCCA
CGGCTGCGTC CCAGCCGGTT CTACGACCTC GTCGTGGAGG TCGCGCTCAT TCGCCCCGGT
CCGATTCAAG GTGGGTCGGT CCATCCCTAC CTGCGTCGCC GAGCCGGTGA GGAGCCAGTG
GTCTATCCGC ACCCGCTCGC TGAGCGAGCA CTCGCAAAGA CCCTCGGTGT GCCGCTGTTC
CAGGAGCAGC TGATGCAGCT CGCGATGGAC GTCGCGGGTT TCAGTGCTGC CGAGGCTGAC
GAGCTGCGCC AGGCGATGGG GGCGAAGCGC TCCAGCGCGC GCATGGCACG GCTCCACGAC
CGGCTCATGG CGGGCATGGC CGCTCGAGGC GTGGATCCGG CCGCGCGCGA GCAGGTCGTC
ACGCAGCTCG AGGCGTTCGC GAACTTCGGG TTTCCCGAGA GCCACGCGGC GTCGTTCGCG
TGGCTGGTCT ACGTGAGTGC ATGGTTCAAG GTCCACTACC CGGCGGCGTT CTACGCCGGG
CTGCTCCGAG CTCAGCCCAT GGGGTTCTGG TCGCCGCAGA CACTCGTACG CGATGCGCGG
CGTCATGGTG TTGGGGTCCT CGGTCCGGAT GTGACGCGGT CGAGCGCACG CGCCGACGTC
GTCGTACGCG ATGGCGAGCA GCTCCTTGCG CTCGGTCTCG ACGCCGTTCG AGGGATCGCA
GCGGCGACGG CGTCGAGCAT CGTCGCGATG CGTCCGTTCG ACTCGCTCCT CGATCTCGTC
CAGCGGGTCG AACTCACGCC CGAGCAGATT CGCCGTCTCG CTGGCGCTGG TGCCCTGCGT
GCACTCGAGC CGTCGGGGCA GCGCGCCATC TGGTTCGCCG ACGAGCTGGC ACGTCGGCAT
CGGATGCTCG ATGGCCTCGG GTTTCCCTCG AGCGAGCCCG TCTTCCCTGC CCTCGACCCT
CGTGAGCGGG CAGCGCTGGA AGTCGACGCG CTCGGCCTGC TGGTCGGGGA CCACCCGATG
GCGTTCGTTC GGGAGCGGTT GTCGACACTT GGCGTCGTGC GCGCCGATCA GCTGGCGAGC
CAGCGCCATG GTCGGCGGGT TCGCGTGGCC GGTACGGTGA CGCATCGCCA GCGCCCTGGT
ACGGCGCGTG GCATCGTCTT CATGAACCTC GAAGATGAGA CGGGCCTCGT CAACGTGTTG
GTCAAGCCGT GGCTCTGGCG TCGCGATCGA TCGCAGGCAC TCCACAGCGC GGTGCTGGTC
GACGGCGTGA TCGAGCGGGC CGGGACCGTC GTGACCGTGG TCGCTGATCG GATCGTGAGC
CTTCCTGAGG CCATCGCCCT TGGCTCCAGG GACTTCCAGT AG
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| Protein sequence | MVARGELRVS EAVVELHAHS SFSFLDGVVD PEDLVEAAAV AGYRALALTD HNGLYGVPRF
LEAARRVGVV PLVGAELTLA TTTPRAGATD PEGEHLVVLA ASPEGYRALS RVIATGHMRT
GEKGRFDLTI DDLAEAAPSG GWFVLAGWRK SPPGRALAHA GPSAAERSVR SLWERFGDAL
VLELVDTLDP ADTVRNDVLA AIGAHHGLPV VATQAVHAID VRTQRAAVVA AAIRARRTLG
ELDGYLPGAG PPVLRPARAL RARFGRYPGV VDAAVELAAR CAFNVDLVAP GLPRDVVAMG
VDDDEALVAL VAERAPRRYG PRAAPRIPGA WEQIDHELDV IRSLGFAGYF LVVTDIVDFC
VREGIYCQGR GSAANSAVCY ALGITNVDPV ALGLLFERFL SPERDGPPDI DVDIESRRRE
EVIQYVYTRY GRARAAQVAS VITYRARSAL RDSARVFGVD QATLAAWSKG VEHRGSVARS
LAERDGAGRP LLEVPAVIAE VASVLEGAPR HLGVHVGGMV LCDRPIVDVC PTEWARAEGR
SVLQWDKDDC ARMGLVKFDL LGLGMLEAIH EMVDLVRERV GVEVDIATLE QDPAVYEMLA
RADSVGVFQV ESRAQMATLP RLRPSRFYDL VVEVALIRPG PIQGGSVHPY LRRRAGEEPV
VYPHPLAERA LAKTLGVPLF QEQLMQLAMD VAGFSAAEAD ELRQAMGAKR SSARMARLHD
RLMAGMAARG VDPAAREQVV TQLEAFANFG FPESHAASFA WLVYVSAWFK VHYPAAFYAG
LLRAQPMGFW SPQTLVRDAR RHGVGVLGPD VTRSSARADV VVRDGEQLLA LGLDAVRGIA
AATASSIVAM RPFDSLLDLV QRVELTPEQI RRLAGAGALR ALEPSGQRAI WFADELARRH
RMLDGLGFPS SEPVFPALDP RERAALEVDA LGLLVGDHPM AFVRERLSTL GVVRADQLAS
QRHGRRVRVA GTVTHRQRPG TARGIVFMNL EDETGLVNVL VKPWLWRRDR SQALHSAVLV
DGVIERAGTV VTVVADRIVS LPEAIALGSR DFQ
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