Gene Afer_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1603 
Symbol 
ID8323694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1692457 
End bp1692975 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID644952740 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003110198 
Protein GI256372374 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.535625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCC ACGAGCGCCC GTTCGGGCGC TGTCTCGAGG ACTTCGTCGT CGGTGACGTG 
CTTCGGCACT GGCCGGGCAA GACCATCACC GAGGCCGACG ACCATCTCTT CTGCCTGCTC 
ACAATGAACC ATCATCCGCT CCACATCGAT GAGCGGTTCG CAGAGCTCGC CACGGTGCAC 
GGGCGCAACG TGGTCGTGGG GAACCTGGTG TACTCGCTCG TTCTCGGCAT GAGCGTGCCG 
GATGTGTCGG GCTCGGCCAT CGCCAATCTC GAGGTCAACA ACCTCCGTCA CCTGTACCCA 
ACGTTCCATG GTGACACGAT CTACGCTGAG AGCACCGTCC TTGCGGTCGT GCCGTCGCGA 
TCGAAGCCGG ACCGCGGTGT GGTGGAGGTC GAGACCCGCG GCTACAACCA AGATGGTCAG 
GAGGTCGTCT CCTTTCGGCG CAAGGTCTTG GTGTGGCGTC GCGACGCGCT GCCCGAGCGT 
CCGCGGCCGG AGCCGCGTGA CGAGGCGTCG GCGACCTAG
 
Protein sequence
MATHERPFGR CLEDFVVGDV LRHWPGKTIT EADDHLFCLL TMNHHPLHID ERFAELATVH 
GRNVVVGNLV YSLVLGMSVP DVSGSAIANL EVNNLRHLYP TFHGDTIYAE STVLAVVPSR 
SKPDRGVVEV ETRGYNQDGQ EVVSFRRKVL VWRRDALPER PRPEPRDEAS AT