| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1600 |
|---|
| Symbol | |
|---|
| ID | 8323691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | - |
|---|
| Start bp | 1686846 |
|---|
| End bp | 1688405 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644952737 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003110195 |
|---|
| Protein GI | 256372371 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG TGGGTCGGCG GGCGGTCGTA GGGAGCCTGG TCCGAGCCGT CGTGTCCGTC
ACCACGGCCG TCGCGGCCGG GGTTGCCATC GTCGCTGGCG CGAACGTGCT CGCTCCGCCG
CCCGCCTCGC CGTCGTCGCC GCCGCGCCAG CCGCTCGTCG TCGCAGACGT GGGGCCACGT
CCAAGCCACA CGCTGGTCGG GATCGGGGCG AGTGGCGCCT GGTGGTCGCG ACCGGTCGCA
GCGCTCGGCT CCGCCACGAT CGCGCAGGTG GGCCGGCTGC TCTACTCGTC GCGCGGGTTG
GAGCTGTCGC AGTTCCGCTT CAACATCGGC GGCGGCGGCG TGGGTGTGAC GACGTGGTGG
AAGGCGCCGC CGAGCTTCTA CCAAGCCAAC GGTACGTTCG ACTTCCACGC CGATCCCCAG
GGGGTGCTCT TTGCCCGTCA AGCGGCCTCG TGGGGGGTGC GCGATCTTGT GGGGTTCGTC
AACGCAGCAC CCCCGCAGTT CACATCGAAC CACCGCAGCT GCGGCGGTAC GCTCCTCGCT
GGCGATGTCG CTGCGTACGC GGACGAGCTC GCGCTGACCG TGGCGGGTCT GTGGCGCGTC
GACCACGTCA AGCTGCGCTA CGTGTCGCCC ATGAACGAGC CGGTGGGTTC GCAAGCGGCC
TGTCGCCAAG AGGGAATGGC TGTTCCGGTG GCAGAGCGTG GTCCGCTCGT CGTGGACCTC
GCGCGCGATC TGGCGCGTGT TGCGCCGTGG GCGCGCGTGA TCGCCGACGA GTCCTCCTAC
GCCACGCAAC TGCTCCGGCA GGCGCCACGG TGGCTGACGT ATCCGGGCGT GCGTGCCTCG
CTCGCCGCCC TCGCGGTCCA TGGCTACGAC TACCCCTCGC GGGCGGTGCT CCACCAGGTC
GCGTTGCTCG GACGTCGATG GGGCGTGCCG ATCTGGGACA CGGAGATCTG CTGCTATGAC
GGGGAGGGGT TCGGCTACCA GTACGACCCA ACCATGACGT CGGGCCTCTG GCTCGCCCAG
ACGATCTACA ACGACCTCAT GGTCGAGAAC GCCTCGGTGT TCGACTGGTG GCTGGCACTC
TCACCGGATC TCGGCTGCAG TCCTGCGGCC GACCCTGGGT GCTTTCGAGA CATCAACCCA
CTCGGGCGCA ACGACGGACT CATCTACTTC GACCTGAACG GTGCACGCGA CGGCGACCAC
ACGCTCTACC TGACCAAGCG CTACGACGTG CTGGGACAGT TCTCTCGCTA CCTCCGTCCG
GGCATGGGTC TCGTGCCGGT GACGACGTCG GATGCGCGGG TGGAGATGCT CGCGGGGCGT
GCACCTGGGC GTCTCGTACT GATCGCCATC AACTTGACCG CCCCTGGCTC AGCCCCCTTG
CCTCTCGAGG TGCAGCTTCC CCCGGGACTT GACGGGGTCC AGGCCATGGG CGCGGTGGTG
ACGAATCCGA CCAAGTCGCT CCAGCCGACG GCGCTGCCGG ACGTCGACGC GCACAGCGTG
GTGGCGCTGC TCACGCCCGA TTCGGTGACG ACCTACGTGG TGCGGACTGC CCGAAGCTAG
|
|---|
| Protein sequence | MRDVGRRAVV GSLVRAVVSV TTAVAAGVAI VAGANVLAPP PASPSSPPRQ PLVVADVGPR
PSHTLVGIGA SGAWWSRPVA ALGSATIAQV GRLLYSSRGL ELSQFRFNIG GGGVGVTTWW
KAPPSFYQAN GTFDFHADPQ GVLFARQAAS WGVRDLVGFV NAAPPQFTSN HRSCGGTLLA
GDVAAYADEL ALTVAGLWRV DHVKLRYVSP MNEPVGSQAA CRQEGMAVPV AERGPLVVDL
ARDLARVAPW ARVIADESSY ATQLLRQAPR WLTYPGVRAS LAALAVHGYD YPSRAVLHQV
ALLGRRWGVP IWDTEICCYD GEGFGYQYDP TMTSGLWLAQ TIYNDLMVEN ASVFDWWLAL
SPDLGCSPAA DPGCFRDINP LGRNDGLIYF DLNGARDGDH TLYLTKRYDV LGQFSRYLRP
GMGLVPVTTS DARVEMLAGR APGRLVLIAI NLTAPGSAPL PLEVQLPPGL DGVQAMGAVV
TNPTKSLQPT ALPDVDAHSV VALLTPDSVT TYVVRTARS
|
|---|
| |