Gene Afer_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1595 
Symbol 
ID8323686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1681489 
End bp1682067 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID644952732 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_003110190 
Protein GI256372366 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCATCGTCG TTGGTCTCGG GAACCCTGGC GCTCGTTACC GCTTCACTCG CCACAACGCA 
GGCGCGCTGA CCGTCGATCT GCTCGCTCGA CGCCTCGACG TGAGGTTGAC GCCGGGTCAC 
CGCTCGATCG TCGGCAGTGG GCGACTTGGC GATCACCGAG CGGTGCTCGC AGTGCCCCAG 
ACCTACATGA ATGACTCAGG TGCCGCCGTT GGGGCGGTGC TGCGCTACTT CCACGCTGAC 
CCTGTGACGC AGCTGGTCGT GGTTCACGAC GAGCTCGATC TCGTGCTCGG TCGCGTACAG 
CTCAAGTACG GGGGCGGGCT CGCTGGCCAC AACGGCCTGC GCTCCATCGT CGCCCACATC 
GGCACGCGAG ACTTCTGGCG CGTGCGTATT GGCATCGGAC GCCCGGCCGG CCGTCAGGCC 
GTCGTCGATT GGGTCCTCAC CGAGGTACGC GGCCCGGAGC GGACCTCCTT CGACGTCGGT 
GTCGAGCGGG GTGCCGATGC CGTCGTCGAT CTCGTGTCGC TTGGTCCGGA GCGCGCCATG 
ACCACCTACA ACGCCCGTGG CGTCGATCGA TCCGCATGA
 
Protein sequence
MIVVGLGNPG ARYRFTRHNA GALTVDLLAR RLDVRLTPGH RSIVGSGRLG DHRAVLAVPQ 
TYMNDSGAAV GAVLRYFHAD PVTQLVVVHD ELDLVLGRVQ LKYGGGLAGH NGLRSIVAHI 
GTRDFWRVRI GIGRPAGRQA VVDWVLTEVR GPERTSFDVG VERGADAVVD LVSLGPERAM 
TTYNARGVDR SA