| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1575 |
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| Symbol | |
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| ID | 8323666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1655929 |
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| End bp | 1657143 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952712 |
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| Product | solute-binding protein |
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| Protein accession | YP_003110170 |
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| Protein GI | 256372346 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.250524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGAATGT CGTCGTTCTC GCGAGCGTCG CTCGTGGTCG CTGGGGCCGC GATGGCGATC
GCGGCCTGTG GCTCGACCAG TTCGAGCTCG AGCGGTGGAT CCTCGGGTTC CACGAGTGCG
TCCACGCCGG TGGTGACAGC GGCCTCGTTC AACCGGAACT TCACCGCCAT GAGCAGCCTG
AGCTCGCTGG CGGCCAAGGG CAAGGGTCTC GTGGCTGCCA TCTTGCCCGA TACGGTGTCC
TCGGCTCGCT ACACCGAGTT CGATGCGCCG TTCCTCACGA AGGCCTTCCA GTTGGCTGGC
CTGAAGTCCA ACCAGTACAT CGTCGAGAAC GCCCAGGGCT CCGACGCGAC CGAGCTGTCG
ATGGCCCAGA GCGCGATCAG CCGTGGGGCG AGCGTCATCA TCTTCGATCC GCTCGACTCG
GGCGTCGGTG TCGAGATCGA GAAGTACGCC GCTCAGCACG GTGTTCGCGT CATCAACTAT
GACCGTCTCA CGCTGGGCTC CTCGCCGAGC GATTATTACG TCAGCTTCAA CAACGTCCGC
GTCGGACAGC TGATTGGCCA GGGATTCGTC GCCTGCGTCG CCGCGTGGCA CGTGACGCAT
CCGAACGTGC TGGTCATGCG TGGCGCACCG ACCGACAACA ACGCCACCCT CTTTGCCGAG
GGGTACGATT CGGTGATCGA TCCGTACTTC AAGTCGGGCA AGTGGACCTT GGTCGGGACG
CCTCCAGGGA CGTGGACGCC GTCGGTAGCG TTGACGGAGT TCCAGCAGAT GTACACGGCG
CATCCCAACA TCAACGCCGT GGTGACGCCG AACGATGAGA ATGCTGCGCC GATCATCTCG
TACCTGCAGT CGCTCCACAT CGCGCCGAAG ACGATCCCAT TCACCGGACA GGACGCGACG
CTCCAAGGAT TGCAGAACAT CCTGGCTGGT TACCAGTGCG GGACCGTGTA CAAGCCCATC
TATCAGGAGG CCCAGGCGGC CGTCTCCCTC GCGCTCTACC TGCGCGCTGG TAAGACGCCT
CCGGCAGCTC TCTTGAACGG CACCACCCAT GATCCGGTCT CGGGCAACAA CATCCCGTCG
GTGTTGCTGA CGCCCGAGTG GGTCACCACC AAGAACATGG CGTCGACCGT GATCGCTGAC
AACTTCGTGC CGGCGTCGCA GCTGTGCTCG GGCACCTATG CCTCGGCGTG CGCGGCCGCG
GGCATCAAGG CCTAG
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| Protein sequence | MRMSSFSRAS LVVAGAAMAI AACGSTSSSS SGGSSGSTSA STPVVTAASF NRNFTAMSSL
SSLAAKGKGL VAAILPDTVS SARYTEFDAP FLTKAFQLAG LKSNQYIVEN AQGSDATELS
MAQSAISRGA SVIIFDPLDS GVGVEIEKYA AQHGVRVINY DRLTLGSSPS DYYVSFNNVR
VGQLIGQGFV ACVAAWHVTH PNVLVMRGAP TDNNATLFAE GYDSVIDPYF KSGKWTLVGT
PPGTWTPSVA LTEFQQMYTA HPNINAVVTP NDENAAPIIS YLQSLHIAPK TIPFTGQDAT
LQGLQNILAG YQCGTVYKPI YQEAQAAVSL ALYLRAGKTP PAALLNGTTH DPVSGNNIPS
VLLTPEWVTT KNMASTVIAD NFVPASQLCS GTYASACAAA GIKA
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