| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1573 |
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| Symbol | |
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| ID | 8323664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1653735 |
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| End bp | 1655069 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644952710 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003110168 |
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| Protein GI | 256372344 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.984354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGAAC GAGAGCAACT CCCCGTTGAT GTCGAGGAGG CCCCTTCGTC GAATGGACAT
GCGCCGGCGG CGGCACCGGC GAGCGCACCT GCCCAGGGTG CCGAGATCGT GCTCACGGAC
ACCCGAAGCT GGATCTCCAG CTGGTGGCGG CGCGTGCGTT CGGGTGAGAG CGGCATGTTG
CCGGTGTTGG CCGGCCTCGT CGTCATCGTG ATCATCTTCC AGGCGGAGAA CTCCTTGTTT
CTCTCCGCCG GCAATCTCGT CAACTTGCTG GTGCAAGGCG CGACGTTCGT CCTGCTCGGC
ATGGCTGAAG TGTTCGTCTT GCTGCTCGGC GAGATCGATC TGTCGGTTGG GTACGTGGCC
GGTGTTGGGG CCTCCGTCAT GGCGATCCTG GCTTCGCCGA TCATCGCCAA GGAGCCGTGG
TGGGTCGCGC TACTCGCTGG CCTTGCGGTC TCCACCCTCA TCGGCGTGGT GCAGGGAATC
CTCATCACGA AGCTCAACTT GCCGTCCTTC GTCGTCACCC TGGCTGGTCT GCTGGGGTGG
GAAGGGGTCA TGCTCTACAT GATCGACCAC GCGGCGCCCG CGGCCGGCGG TGTGATCTCG
ATCTCGTCGA ACATCCTCAA CGATATTGTC AACGGCAATC TCTCGGTGGT CGCAGGGTGG
GTCATCGCAG CGGTGGTGGT CGCGCTCTGG GGTGCGTGGA TGTTCTTCGG TGCCGAGCGG
ATGCGGCGGG CTGGGCTCTC GGCGCCTCCG CGGGGTGTCA TTGCGCTGCG TATTGCGCTC
GGTGCCGTGG CTGCGGTCGT GTTGCTGATC GTGGCGAACA CCAACCGCGG GGTGACCGTC
ACGCTCGAGG GCGTACCGTT CGTCGTCCCC ATTCTCGTGG GGGTGCTTGG TCTCTACACA
TTCGTCCTGA ATCGGACCCG GTTCGGCCGT TACATCTACG CCATCGGTGG CAACGCCGAG
GCCGCTCGTC GCGCCGGCAT CAATCTCTCG CGGGTTCGGA TCGCGGCCTT CGCGCTCTCG
GGCTTGACTG CGGGTATCGC GGGGGTCGTC TACGCCTCGC GCCTCGGATC GATCTCGGAG
AACATCGACG GCGGCACGCT CGTGCTCTAT GGGGTCGCGG CAGCAGTGAT CGGCGGCACG
AGCCTGTTCG GCGGGCGCGG CAAGATGGTG CACGCCGTGC TTGGTGGCAT CATCATCGCG
GCCATCTACA ACGGCCTCGG ATTGTTGGGC GTCAGTGCGG CAGCCGAGTA CATCGTGACG
GCGCTGGTCT TGCTTGCGGC CGTGACCGTC GATTCGCTGA CACGACGTCG GCAGGGAGCC
GAAGCACGGC GCTGA
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| Protein sequence | MVEREQLPVD VEEAPSSNGH APAAAPASAP AQGAEIVLTD TRSWISSWWR RVRSGESGML
PVLAGLVVIV IIFQAENSLF LSAGNLVNLL VQGATFVLLG MAEVFVLLLG EIDLSVGYVA
GVGASVMAIL ASPIIAKEPW WVALLAGLAV STLIGVVQGI LITKLNLPSF VVTLAGLLGW
EGVMLYMIDH AAPAAGGVIS ISSNILNDIV NGNLSVVAGW VIAAVVVALW GAWMFFGAER
MRRAGLSAPP RGVIALRIAL GAVAAVVLLI VANTNRGVTV TLEGVPFVVP ILVGVLGLYT
FVLNRTRFGR YIYAIGGNAE AARRAGINLS RVRIAAFALS GLTAGIAGVV YASRLGSISE
NIDGGTLVLY GVAAAVIGGT SLFGGRGKMV HAVLGGIIIA AIYNGLGLLG VSAAAEYIVT
ALVLLAAVTV DSLTRRRQGA EARR
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