Gene Afer_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1556 
Symbol 
ID8323646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1637298 
End bp1638056 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID644952692 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003110151 
Protein GI256372327 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.449273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGGGC GCAGCACGCC GCTCATCGTG GCGCATCGCG GGGGCATGGG AGAGGCGTGC 
GAGTCGACCC GCGAATCCTT TGCGAGTGCA GCGGCGCGCG GTGCTACTGG GGTCGAGCTC
GACGTGCGCA AGAGTGCCGA TGGGGTGCTG GTGGTCCATC ACGACCCGAC GCTGGATCGG
ACCGCTGGTG TGGCGCTCTC CATCGCATCG GCGACCTGGG AGCAACTCGC GACGATTCGG
CTCCCGTGCG GCACCCACGA GGCATCGCTC GCTCGACTCG AGGAGGTGCT GGCGGTGACC
GAGGGCCTCG CGTGTTCCAT CGACATCAAG GACGACGATG GGCCCTCGGG CGACCTCGAG
GCACGCGTCA TCGCGACGCT CACGGATGCG GGGGCCCTCG AGCGCTGCGT GGTCGCCAGC
TTTCATCGGG GGGTTCTGGA GCGGGTGAGG TCGCGCTGGC CCGGCGTGCG GACCACCGCT
GCCCCCAGTG AGGTGGCAGC CTGGATCGCT GGTTCGCGCC AGCGTCGACC CCCCTGGCGC
GTGTTGTCGG TACCGCGTTC GTATCGTGGC GTTCCACTGC TCACCGAGCG GCGCGTTCGG
GACGCGCACG CGCTCGGTTG CGAGGTGTGG GTGTGGACGA TCAACGATGT CGCCGAGGCG
ACGTTCCTTG ACAGCCTTGG TGTCGACGCC ATCATCACCG ACGTCCCGGG GCTCCTCTCG
CGCGCGCTCG GTCGATCGTC GCGGCAGGCA CGCCACTAG
 
Protein sequence
MDGRSTPLIV AHRGGMGEAC ESTRESFASA AARGATGVEL DVRKSADGVL VVHHDPTLDR 
TAGVALSIAS ATWEQLATIR LPCGTHEASL ARLEEVLAVT EGLACSIDIK DDDGPSGDLE
ARVIATLTDA GALERCVVAS FHRGVLERVR SRWPGVRTTA APSEVAAWIA GSRQRRPPWR
VLSVPRSYRG VPLLTERRVR DAHALGCEVW VWTINDVAEA TFLDSLGVDA IITDVPGLLS
RALGRSSRQA RH