Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1556 |
Symbol | |
ID | 8323646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1637298 |
End bp | 1638056 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644952692 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003110151 |
Protein GI | 256372327 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.449273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGGGC GCAGCACGCC GCTCATCGTG GCGCATCGCG GGGGCATGGG AGAGGCGTGC GAGTCGACCC GCGAATCCTT TGCGAGTGCA GCGGCGCGCG GTGCTACTGG GGTCGAGCTC GACGTGCGCA AGAGTGCCGA TGGGGTGCTG GTGGTCCATC ACGACCCGAC GCTGGATCGG ACCGCTGGTG TGGCGCTCTC CATCGCATCG GCGACCTGGG AGCAACTCGC GACGATTCGG CTCCCGTGCG GCACCCACGA GGCATCGCTC GCTCGACTCG AGGAGGTGCT GGCGGTGACC GAGGGCCTCG CGTGTTCCAT CGACATCAAG GACGACGATG GGCCCTCGGG CGACCTCGAG GCACGCGTCA TCGCGACGCT CACGGATGCG GGGGCCCTCG AGCGCTGCGT GGTCGCCAGC TTTCATCGGG GGGTTCTGGA GCGGGTGAGG TCGCGCTGGC CCGGCGTGCG GACCACCGCT GCCCCCAGTG AGGTGGCAGC CTGGATCGCT GGTTCGCGCC AGCGTCGACC CCCCTGGCGC GTGTTGTCGG TACCGCGTTC GTATCGTGGC GTTCCACTGC TCACCGAGCG GCGCGTTCGG GACGCGCACG CGCTCGGTTG CGAGGTGTGG GTGTGGACGA TCAACGATGT CGCCGAGGCG ACGTTCCTTG ACAGCCTTGG TGTCGACGCC ATCATCACCG ACGTCCCGGG GCTCCTCTCG CGCGCGCTCG GTCGATCGTC GCGGCAGGCA CGCCACTAG
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Protein sequence | MDGRSTPLIV AHRGGMGEAC ESTRESFASA AARGATGVEL DVRKSADGVL VVHHDPTLDR TAGVALSIAS ATWEQLATIR LPCGTHEASL ARLEEVLAVT EGLACSIDIK DDDGPSGDLE ARVIATLTDA GALERCVVAS FHRGVLERVR SRWPGVRTTA APSEVAAWIA GSRQRRPPWR VLSVPRSYRG VPLLTERRVR DAHALGCEVW VWTINDVAEA TFLDSLGVDA IITDVPGLLS RALGRSSRQA RH
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