| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1553 |
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| Symbol | |
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| ID | 8323643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1632312 |
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| End bp | 1634204 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644952689 |
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| Product | serine/threonine protein kinase with PASTA sensor(s) |
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| Protein accession | YP_003110148 |
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| Protein GI | 256372324 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACA TCACAGGTCG GACCCTGGTT GGTCGCTACG TCGTCCAGCG GCGCCTCGGC
ACCGGTGGTG CCGGTGTCGT CTACGTCGCG CTCGACCTTC GACTCGGTGC GCCCGTCGCG
CTCAAGGTGC TGCGGCCGGA GCTGCGCACC GATGGCACCT TTGTTCGAGA GCTGCGGCGC
GAAGCGCAGG TCATCTCGCA GATGCAGCAT CCCCACGTCG TTCGTGTGCT CGACCTCCTC
GACGTTGGCC CGCCGATCGG GCTCGTGCTC GTGATGGAGT ACATGCCGAA CGGATCGCTG
AAGGATCTCG TCCGCCGTGG TCGCCGTCTC GACGATGCGC AAGTCGCCCG GATCGCCCAA
GAGGTCGCGA GCGCGCTGGC TGCCGCCCAT GCGCACGGTC TGACCCATCG GGACGTCAAG
CCCGGGAACA TCTTGCTCGA CGAGACGGGC CACGTGCGCC TGGCTGACTT CGGGCTGGTG
CGTCACGCAT CGGAGACCTC CGGTGGGCGC CACGCCGGCA CACCGAGATA CGCAGCGCCC
GAACAGCTGC GCTCGGCCCT GGGTGCACAC GACGAGCTGG CGTCTCGCAG TGAGGCCCCG
GCCGACACCT ACGCGCTCGG GCTCGTGCTC TATGAGCTCG CCACTGGCTC GTTCCCGTTC
GAGGGCGGGT CGATCGAGGA GGTCGCGCGC CAACGCCTCA CGAAGGACGT GGTCAACCCT
GAGCCCGGAC GACAGCTGCT CGACGTGGTG GTTCGCATGA CGCGTCGGGA TCCCGCCGAG
CGACCGGACG ATGAGACGCT GCATCGTCTC ATCGACGAAC TGGTGCGCGC GCTCCCGGCG
CCGTCACCGC TACCGCTCGA AAATCCTGCG CACGATCCTG AGGCCGTCCT CGACCCAAGT
TCGTTGTCGG TCGCGTTCGT CCCCCCGGAT CAGGGCCGCA CGGCGTCGCT GACGAGCATC
GAGGCACGCC CTCCAGCGCG ACGTCGGCGG CGTGTGTGGC TCATGCTGCT CGTCATCGTG
GTCGTGGCCG CCCTGGGTGC AACCTGGTAC CTTGCCGTTC GACGCCTGAG CGTGCCGCGG
CTGGCAGACC TCGAACCTGC CGCAGCACGA GCACGCCTCT CCGAGCTCGG CTTCTTCCGC
ATTCGGACGG GCGAGACCTA CAGCGCCACG GTCGCGCCCG GACGCGTCGT GGGGACCGTG
CCTGGTGCAG GGGTTGCCCT CCATCCGCTC GCGGTCGTCG AGATCCTCGT GTCACGCGGC
CATGCGCCGG TGGTCGCCCC TGACGTCGTC GGCTTCATCG CCTCCGATGC TCGACGCGCG
CTCTCGCGTG TCGGTCTTGG TGTGCGGCTC GATCGGGCCT ACTCGGCCAC CGTCTCGGCC
GGCACCGTGA TCCGAGAGCC CCTGGCTGGC CAACGCGTCC GGTGGCACGG CGTCGTCGTG
CTGATCGTGT CCGCTGGACC GCCGCCGCGC GCCGTGCCGG CGGTCGCGGG AGAGCCAGAG
GCGACTGCAG CAGCCGCCCT CCGCGCGGCT GGATTCGCCG TCACGACGTC GCAGGCGTAC
TCGACCTCGG TCCCATCGGG CGATGTCGTC AGCGAATCGC CGGGTGCGGG CACGGTGGCT
CCGTTCGGCA GCACTGTGGC GCTCGTGATC TCGCAAGGTC CCCCCGACGT CGCGGTCCCG
AACCTCTTCG ACGACACCTT TGCGCAAGCG GTCGCTGCGC TCCAGGCGGA TCACCTGACC
TATGGCCAGC TCACGACGCC GGGCGGCCTG TCGTTGAACG GCGTTGCGTC CTACCTCGGC
ACCTCGGCGG TCGTCGTCGC CCAGGGTGAG CCGGCTGGCA CCGAGGTCCC GGTCGGGAGC
GCGGTGAACT TGGTGCTCGC CCCGAACTCG TAG
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| Protein sequence | MDDITGRTLV GRYVVQRRLG TGGAGVVYVA LDLRLGAPVA LKVLRPELRT DGTFVRELRR
EAQVISQMQH PHVVRVLDLL DVGPPIGLVL VMEYMPNGSL KDLVRRGRRL DDAQVARIAQ
EVASALAAAH AHGLTHRDVK PGNILLDETG HVRLADFGLV RHASETSGGR HAGTPRYAAP
EQLRSALGAH DELASRSEAP ADTYALGLVL YELATGSFPF EGGSIEEVAR QRLTKDVVNP
EPGRQLLDVV VRMTRRDPAE RPDDETLHRL IDELVRALPA PSPLPLENPA HDPEAVLDPS
SLSVAFVPPD QGRTASLTSI EARPPARRRR RVWLMLLVIV VVAALGATWY LAVRRLSVPR
LADLEPAAAR ARLSELGFFR IRTGETYSAT VAPGRVVGTV PGAGVALHPL AVVEILVSRG
HAPVVAPDVV GFIASDARRA LSRVGLGVRL DRAYSATVSA GTVIREPLAG QRVRWHGVVV
LIVSAGPPPR AVPAVAGEPE ATAAAALRAA GFAVTTSQAY STSVPSGDVV SESPGAGTVA
PFGSTVALVI SQGPPDVAVP NLFDDTFAQA VAALQADHLT YGQLTTPGGL SLNGVASYLG
TSAVVVAQGE PAGTEVPVGS AVNLVLAPNS
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