| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1548 |
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| Symbol | |
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| ID | 8323638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1626838 |
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| End bp | 1628541 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952684 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_003110143 |
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| Protein GI | 256372319 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0456866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCGGC GGCAGCTGAA GGTTCGGAGC CGGGACGTCA CCGAGGGGCC GACGCGAGCA
CCAGCGCGCG CGATGCTTCG CGCGGTTGGG CTGGTCGAGG AGGACTTCGA CAAGCCGCAG
ATTGCGGTCG CCTCATCGTG GAACGAGGTG ACACCATGTA ATTTGCCGCT CGGTGAGCTC
GCCAAGCGGG TCAAGGCTGG CGTGCGGTCA GCCGGCGGCG TGCCGCTCGA GTTCGCAACC
ATCGCGGTAT CGGACGGCAT CTCCATGGGT CATGAGGGGA TGCACTCGTC CCTCGTGTCG
CGCGAGGTCA TCGCGGATTC GGTGGAGCTC ATGGTGCACG CCGAGCGCAT GGACGGACTC
GTGACGCTTG CCGGGTGCGA CAAGTCGCTC CCCGGCATGA TGATGGCCGC GGCACGGCTG
GACCTAGCGA GCGTGTTCGT CTACGGCGGC TCCATCCTCC CGGGTCATCT GAAGGATCAG
CGGCTCGACA TCGTCTCGGT GTTCGAGGCG GTCGGTGCAT ATGCTGCCGG ACAGATCAGC
CAGGACGAAC TGAGCGCGAT CGAGCGCAAC GCGTGCCCGA CGCCCGGTTC GTGCGCGGGT
ATGTACACCG CCAACACCAT GGCCTCGGTG TCCGAAGCGC TGGGCTTGGC GCCGCTCGGG
TCGGCGTCCG CGCCAGCGGT GGATCGCCGT CGTGCAGACG CGGCGTTCGA GGCGGGCGAA
CTCGTCATGC GCCAGCTCGA GCTCGGGATC ACGGCGCGAC GCATCCTCAC CAAGGAGGCC
TTCGAGAACG CCATCGCAAC CGTCATGGCG CTCGGCGGGT CGACGAACGC CGTCTTGCAC
CTGATGGCGA TCGCGAACGA GGCCCGTGTC GAGCTGCGGC TCGATGACTT CAACCGGATC
GCCGCGAGGG TTCCGCACCT CGCCGACACC AAGCCGCACG GCAAGTTCTA CATGACCGAC
ATCGACCGCG TCGGCGGGGT CCCGGTCGTG CTGCGTGAGC TGGCCGAGGC GGGTCTCGTC
CACACCGACG TACTCACGGC CACGGGGCGA ACCCTCGGTG ATGAACTCGA TGCGTATGAT
CCGCCAGCGG CCGATGGAGT CGTGATTCAC CGTCTCGACG ACCCGATTCA TGCCGTCGGG
GGTATCGCCG TGCTGACGGG AAGCCTCGCG CCGCGCGGAT CGGTCGTGAA GGTGGCCGGC
ATCGACCAGG ATGTCTTCGA GGGGACGGCC CGGGTGTTCG ACCGCGAGGA AGCTGCCCTG
ACCGCCATCT TGGCCGGGGA GATCCGCGCT GGCGACGTCG TCGTGATCCG CTACGAGGGC
CCGAAGGGCG GGCCCGGCAT GCGCGAGATG CTCGCCGTGA CCGGTGCGAT GAAGGGGGCG
GGACGCGGTT CGGACGCGGC GCTCGTCACC GACGGTCGCT TTTCGGGGGG CACCCATGGA
CTGTGCGTCG GTCACGTGGC TCCCGAGGCC GCCGACGGCG GCCCGATCGC GCTCGTGCGC
GACGGGGACC GGATTCGCAT CGACGTCCCG AACCATGCGA TCGATCTACT CGTCGCCCCG
GACGAGCTTG AGCGACGACG AGCGTCGTTC GCGCCCTTGC CCCCTCGCTA CACGAGCGGT
GCGCTCGCGA AGTTCGCGGC GCTCGTGCGC GGTGCCGATG TTGGGGCGGT GACCTCGGCA
GGATTCGACG ACGACTCGCG CTAG
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| Protein sequence | MERRQLKVRS RDVTEGPTRA PARAMLRAVG LVEEDFDKPQ IAVASSWNEV TPCNLPLGEL
AKRVKAGVRS AGGVPLEFAT IAVSDGISMG HEGMHSSLVS REVIADSVEL MVHAERMDGL
VTLAGCDKSL PGMMMAAARL DLASVFVYGG SILPGHLKDQ RLDIVSVFEA VGAYAAGQIS
QDELSAIERN ACPTPGSCAG MYTANTMASV SEALGLAPLG SASAPAVDRR RADAAFEAGE
LVMRQLELGI TARRILTKEA FENAIATVMA LGGSTNAVLH LMAIANEARV ELRLDDFNRI
AARVPHLADT KPHGKFYMTD IDRVGGVPVV LRELAEAGLV HTDVLTATGR TLGDELDAYD
PPAADGVVIH RLDDPIHAVG GIAVLTGSLA PRGSVVKVAG IDQDVFEGTA RVFDREEAAL
TAILAGEIRA GDVVVIRYEG PKGGPGMREM LAVTGAMKGA GRGSDAALVT DGRFSGGTHG
LCVGHVAPEA ADGGPIALVR DGDRIRIDVP NHAIDLLVAP DELERRRASF APLPPRYTSG
ALAKFAALVR GADVGAVTSA GFDDDSR
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