| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1547 |
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| Symbol | |
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| ID | 8323637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1624960 |
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| End bp | 1626669 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952683 |
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| Product | acetolactate synthase, large subunit, biosynthetic type |
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| Protein accession | YP_003110142 |
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| Protein GI | 256372318 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.272513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTTGA CGGGAGCACA GGCGCTGGTG CGCGCCCTCG AGATGGAGGG CGTCGACGTG
GTCTTCGGGT TGCCGGGGGG CGCGATCCTT CCGGTCTACG ACCCGTTGCT CGATTCCCCC
ATCCGGCATG TGCTCGTGCG TCACGAGCAA GGTGCTGGCC ACATGGCGGA GGGCTATGCG
CAGGCGAGCG GTCGTCCGGG CGTCGCCATC GTCACGAGCG GTCCGGCGGC GACCAACATC
GTGACGGCGG TCGCCGACGC CGCGATCGAC TCCGTGCCCA TGGTGGTGAT CACCGGCCAG
GTCCCGACCG GGGCGATCGG CTCTGACGCC TTCCAAGAAG TCGACACGAC CGGCATCACC
ATGTCGGTCA CGAAGCACAA CTGGCTCGTG ACCGACCCGG CAGACATCCC GCGCGTGGTG
GCGGAGGCGT TCCACGTCGC CACCACTGGA CGTCCGGGCC CCGTGCTCAT CGACCTCCCG
AAGGATGTCT CAACTGGCGA GCTCGAGTGG TACTGGCCGC GCCGTCTCGA CCTGCCCGGG
TATCAGCCCG TGACCAAGGG CCACCCCAAG ATGATCGAAC AGGCTGCGGC GCTCATCACC
GCGGCTCGGC GGCCGGTCAT CTATGCGGGG GGCGGCCTGG TCCGTGCGGG GGCCGAGCGA
GAGCTCCGAG CGCTCGCGGA ACGCACAGGT ATCCCGGTGG TGACCACCCT GCTCGCTCGG
GGCATCATCC CCGACGACCA TCCGCTCGCG CTCGGCATGC CTGGCATGCA CGGCACCTAT
GCCGCCGTCA TGGCCATGCA GCGCGCTGAC CTGCTCATCA CCCTTGGAGC ACGCTTCGAC
GATCGCGTGA CCGGCCGTGT CAGCGCGTTT GCTCCCGAGG CGAAGGTCAT CCACGTCGAT
GTCGATCCGG CCGAGTTGGG GAAGGTGCGC CGTGCCGACG TACCGATCGT CGGGGACCTG
CGCAACGTCT TGCCGGAGCT GCTTCGGCGC TTGCCGGCCG AGCCGGCCGA CCTTGGGGCC
TGGCGTGCGA CGATCGCCGA GTGGCAGCAG CGCTATCCGC TGTCGTACGT CCCGAGCGAG
CCAGGCTCTG CGACGAAGCC CCAGTTCGTC GTGGAGCGGT TGCGAGCATT GACGCCGGAC
GACACGATTT TGGTGGCTGG CGTGGGTCAG CATCAGATGT GGGCCTCGCA GTTCTGGACG
TTCCGTGCGC CACGCCAGTG GATCAACTCG GGTGGGCTCG GGACGATGGG TTTCGCCGTG
CCGGCGGCGG TCGGCGCCAA GGCTGCCCGG CCTCGGCAGA TGGTCTGGGC GATCGATGGT
GATGGCAGCT TCCAGATGAC GGCGCAGGAG ATCGTCACCG CATCGGCAGA GCGCATCCCG
ATCAAAGTGG CCATCTTGAA CAACGGCTAT CTCGGCATGG TCCGTCAGTG GCAGGAGATG
TTCTACGACG AGCGCTACAG CGAGGTCTAT CTCTCGCCGG ACCTGCCCGA CTACGTGCGC
TGGGCCGAGG CGATGGGGGC GGTGGGCATG CGGGTCGACG CCCCCGAGGA GGTCGACGCT
GCCATCGAGA AGGCCAACGA GGTGGACGAC CGGCCCGTCG TCATCGACTT TCGGGTCGAT
ACCTTCGAGA AGGTGTACCC GATGGTGCCG GCCGGAGCAT CGAACGATGA CATCGTGCTG
CCGCCTCACC TCGTGGGGGA TGGTCGATGA
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| Protein sequence | MRLTGAQALV RALEMEGVDV VFGLPGGAIL PVYDPLLDSP IRHVLVRHEQ GAGHMAEGYA
QASGRPGVAI VTSGPAATNI VTAVADAAID SVPMVVITGQ VPTGAIGSDA FQEVDTTGIT
MSVTKHNWLV TDPADIPRVV AEAFHVATTG RPGPVLIDLP KDVSTGELEW YWPRRLDLPG
YQPVTKGHPK MIEQAAALIT AARRPVIYAG GGLVRAGAER ELRALAERTG IPVVTTLLAR
GIIPDDHPLA LGMPGMHGTY AAVMAMQRAD LLITLGARFD DRVTGRVSAF APEAKVIHVD
VDPAELGKVR RADVPIVGDL RNVLPELLRR LPAEPADLGA WRATIAEWQQ RYPLSYVPSE
PGSATKPQFV VERLRALTPD DTILVAGVGQ HQMWASQFWT FRAPRQWINS GGLGTMGFAV
PAAVGAKAAR PRQMVWAIDG DGSFQMTAQE IVTASAERIP IKVAILNNGY LGMVRQWQEM
FYDERYSEVY LSPDLPDYVR WAEAMGAVGM RVDAPEEVDA AIEKANEVDD RPVVIDFRVD
TFEKVYPMVP AGASNDDIVL PPHLVGDGR
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