Gene Afer_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1545 
Symbol 
ID8323635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1623365 
End bp1624387 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID644952681 
Productketol-acid reductoisomerase 
Protein accessionYP_003110140 
Protein GI256372316 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.159876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAGA TGTACTACGA CAAGGACGCG AATCCCGCTC TCATCACTGA CCGGCGCGTC 
GCCATCATCG GCTACGGGTC CCAAGGTCAT GCGCACGCGC TGAACCTGCT CGACTCGGGG 
GTGCCGGTAC GTGTGGGGCT CCGCGAAGGG TCCGCGTCGG CCGACAAGGC CCGTGCCAGT 
GGACTCGAGG TCTCCAGTGT GGCCGACGCC GTTCGCTGGG CCGATCTCGT CATGCTGCTC 
GTCCCGGACA CGACGGCGCC GACGTTGTGG CGCGAGCAGG TTGCCCCCAA CCTCCAGCCC 
GGGAGCGCGG TCGCGTTCGC GCACGGCTTC AACATTCGCT TTGGATTGAT CGAGCCCGAT 
CCGAGCGTCG ACGTGATCAT GATCGCCCCG AAGGGTCCGG GCCACTTGCT TCGCAGAACC 
TACGAGGAGG GCGGCGGGAT CCCGTCGCTC ATTGCAGTCG CCAACGACGC CAGTGGTCGC 
GCCCACGACA CGGCGCTCGC GTACGCCTGG GCGATCGGAT CGACGCGTGC CGGTGTGCTC 
GACACCACCT TTGCCGAGGA GACCGAGACC GACCTCTTCG GTGAGCAGGT CGTGCTGTGC 
GGTGGACTCT CGCAACTCGT TCGCGCAGGG TTCGACACGC TCGTGGAGGC TGGGTATCAG 
CCAGAGAGTG CCTACTTCGA GTGCCTGCAC GAGCTCAAGC TCATTGTCGA TCTTCTCTAT 
GAGCACGGCT TGTCTGGCAT GTGGTTCTCG GTGTCAGAGA CCGCCGAGTA TGGCGGCCTG 
ACCCGCGGAC CGCGCATCGT CAACGACGAG ACCAGAGCCG AGATGCGTCG CGTGCTCGAC 
GAGATTCGCT CCGGAGCGTT CGCCTCCGAG CTGGTCGACG AGATCGCGGC AGGCCGCCCC 
CGTTTCGAGG CCTTGCGGCG TGAGGCGCGC GAGGCCCAGA TCGAACAGGT TGGTCGAGAT 
CTGCGCGCAA TGATGCCGTT CCTGGCGTCG GCGACCAAGC TCGACCAGGT CTCGGGTGGG 
TGA
 
Protein sequence
MAQMYYDKDA NPALITDRRV AIIGYGSQGH AHALNLLDSG VPVRVGLREG SASADKARAS 
GLEVSSVADA VRWADLVMLL VPDTTAPTLW REQVAPNLQP GSAVAFAHGF NIRFGLIEPD 
PSVDVIMIAP KGPGHLLRRT YEEGGGIPSL IAVANDASGR AHDTALAYAW AIGSTRAGVL 
DTTFAEETET DLFGEQVVLC GGLSQLVRAG FDTLVEAGYQ PESAYFECLH ELKLIVDLLY 
EHGLSGMWFS VSETAEYGGL TRGPRIVNDE TRAEMRRVLD EIRSGAFASE LVDEIAAGRP 
RFEALRREAR EAQIEQVGRD LRAMMPFLAS ATKLDQVSGG