| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1536 |
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| Symbol | |
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| ID | 8323622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1608970 |
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| End bp | 1609998 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952669 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003110132 |
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| Protein GI | 256372308 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGGCCACC GCGTAGCGGT CATCGGCGGC GACGGCATCG GCCCCGAGGT CATCCGAGAA
GCGCTGAAGG TGGTCGAGGC GACGGGCGTC GTCCTCGAAA CCCGAGCAGT GGAGCTCGGT
GCGGCGCACT ATCTCGCAAC GGGCGAGGTC CTCGACGACG CCACACTCGA GTTCCTCCGC
TCCCACGACG CCATCTTGCT CGGCGCCATC GGACCGGCGA TCGGCTCGAC GGAGGTCCCG
CCTGGCGTGC TCGAACGTGG CCTGCTCCTG CGCCTACGCT TCGAACTCGA TCTGTACGTG
AACGAGCGTC CGTTTCGCAC CATCGACCCC TCGGTCACCG TCACGCGGCG CGAGGCAGAC
TTCGTCGTCA TTCGCGAGAA CACCGAGGGG CCCTACGCGG GCGAAGGCGG CTTTCTCTAT
CGCGGAACGG CCCACGAGGT TGCCCAACAG GGATCGCTCA ACACTCGTCA CGGCGTGGAG
CGCGTCGTGC GCTACGCCTT CGAGCGAGCG CGCTCCCGAC CACGCAAGCA TCTGACGCTC
GTCCACAAGA CCAACGTCCT CACCTACGCT GGCGACCTCT GGAGCAGGAC TTTTGCAGAG
GTCGCGGCCG AATATCCCGA CGTCATGACG GCCTACAACC ATGTCGACGC GGCGTCGATC
TACCTCGTCG AGGATCCGGG GCGCTACGAC GTGATCGTCA CTGACAACCT CTTCGGCGAC
ATCTTGACCG ACCTTGCCGC TGCGGTCACG CAGGGCATCG GCTACGCAGC CTCTGCCAAC
CTCAATCCGG CGCGCACCGG ACCCTCGCTG TTCGAGCCCG TCCACGGTGC CGCTCACGAC
CGCGTCGGCA CCAACACCGC CAACCCATGG GCGGCCATTC GGTCGGCGGG AGCCATGCTC
GAGTTCCTCG GCGAGCACGA GGCCGCGTCG CGTATCGAAG CAGCGCTGTC GGTCCTCCCG
CCCCCGTCGG CAACGACAAC GCAGATCGGT GACTTCTATG CAGAAAGGGT GCGTCATGGC
GATCGCTGA
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| Protein sequence | MGHRVAVIGG DGIGPEVIRE ALKVVEATGV VLETRAVELG AAHYLATGEV LDDATLEFLR
SHDAILLGAI GPAIGSTEVP PGVLERGLLL RLRFELDLYV NERPFRTIDP SVTVTRREAD
FVVIRENTEG PYAGEGGFLY RGTAHEVAQQ GSLNTRHGVE RVVRYAFERA RSRPRKHLTL
VHKTNVLTYA GDLWSRTFAE VAAEYPDVMT AYNHVDAASI YLVEDPGRYD VIVTDNLFGD
ILTDLAAAVT QGIGYAASAN LNPARTGPSL FEPVHGAAHD RVGTNTANPW AAIRSAGAML
EFLGEHEAAS RIEAALSVLP PPSATTTQIG DFYAERVRHG DR
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