Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1533 |
Symbol | |
ID | 8323619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1606268 |
End bp | 1606876 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952666 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_003110129 |
Protein GI | 256372305 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.721417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCCA TGCGTGAGTG GGCCGGGCGG ATGGTGCCGC TCGGGCGCAG CGATGTGGAC ACCGACCAGA TCATCCCGAG CGAGTGGCTC AAGCGCATCT CGCGCACCGG ATTCGGCGAG GGACTGTTCT CCGAGTGGCG CGAGGATCCG ACGTTCGTGC TGAACGACCC GCGCATGGCC GGTGCGACGA TCCTGGTGGC ACGGGAGAAC TTCGGCGTCG GGTCCTCGAG GGAGCACGCC GTGTGGGCGC TCACCGATTA CGGGTTTCGG GTCGTCGTCT CGCCCCGGTT CGGGGATATC TTTCGTCAGA ACGCCACCAA GAACGGGCTC CTCCCGGTCG TGCTGGACAC GGCGATCGTC GAGCGCCTCC TCGAGGCGAG CGCGTCCGAT CCGACGATCG TGGCGAGGGT CGACGTGGTC TCGGGTCGCT TCGAGGTGCC AGAACTTGGC CTTGAGGCAT CCTTCGCCCT CGACCCGGCG GTTCGGCACC GGTTCATCCA CGGCCTCGAT GACATCGGCA TCAGCCTGCA GCACGAGGCC GAGATCGAAG CCTTCGAGGC ACGACGACCG TCCTGGCTGC CTCGCCTCGA AGGCTCCGCG TCGGCGTAG
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Protein sequence | MEPMREWAGR MVPLGRSDVD TDQIIPSEWL KRISRTGFGE GLFSEWREDP TFVLNDPRMA GATILVAREN FGVGSSREHA VWALTDYGFR VVVSPRFGDI FRQNATKNGL LPVVLDTAIV ERLLEASASD PTIVARVDVV SGRFEVPELG LEASFALDPA VRHRFIHGLD DIGISLQHEA EIEAFEARRP SWLPRLEGSA SA
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