Gene Afer_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1533 
Symbol 
ID8323619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand- 
Start bp1606268 
End bp1606876 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID644952666 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_003110129 
Protein GI256372305 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.721417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCA TGCGTGAGTG GGCCGGGCGG ATGGTGCCGC TCGGGCGCAG CGATGTGGAC 
ACCGACCAGA TCATCCCGAG CGAGTGGCTC AAGCGCATCT CGCGCACCGG ATTCGGCGAG 
GGACTGTTCT CCGAGTGGCG CGAGGATCCG ACGTTCGTGC TGAACGACCC GCGCATGGCC 
GGTGCGACGA TCCTGGTGGC ACGGGAGAAC TTCGGCGTCG GGTCCTCGAG GGAGCACGCC 
GTGTGGGCGC TCACCGATTA CGGGTTTCGG GTCGTCGTCT CGCCCCGGTT CGGGGATATC 
TTTCGTCAGA ACGCCACCAA GAACGGGCTC CTCCCGGTCG TGCTGGACAC GGCGATCGTC 
GAGCGCCTCC TCGAGGCGAG CGCGTCCGAT CCGACGATCG TGGCGAGGGT CGACGTGGTC 
TCGGGTCGCT TCGAGGTGCC AGAACTTGGC CTTGAGGCAT CCTTCGCCCT CGACCCGGCG 
GTTCGGCACC GGTTCATCCA CGGCCTCGAT GACATCGGCA TCAGCCTGCA GCACGAGGCC 
GAGATCGAAG CCTTCGAGGC ACGACGACCG TCCTGGCTGC CTCGCCTCGA AGGCTCCGCG 
TCGGCGTAG
 
Protein sequence
MEPMREWAGR MVPLGRSDVD TDQIIPSEWL KRISRTGFGE GLFSEWREDP TFVLNDPRMA 
GATILVAREN FGVGSSREHA VWALTDYGFR VVVSPRFGDI FRQNATKNGL LPVVLDTAIV 
ERLLEASASD PTIVARVDVV SGRFEVPELG LEASFALDPA VRHRFIHGLD DIGISLQHEA 
EIEAFEARRP SWLPRLEGSA SA