| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1529 |
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| Symbol | |
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| ID | 8323615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1600431 |
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| End bp | 1601981 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952662 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003110125 |
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| Protein GI | 256372301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAGG TAGGAACGCA AGAGCGGATT CGGATCTTCG ATACGACCCT GCGCGACGGT
GAGCAGGCGC CCGGCATCTC GCTCGATCCT TTGGAGAAGC TCGAGATCGC TGAGCAGCTT
GCTCGACTCG GCGTGGACAT CATCGAGGCG GGATTCCCGG TCGCGAGCCA GGGCGACTTC
GACGCGGTCC GCCAGATCGC GCGCCAGGTG CACGGCCCTG TGATCTGCGG CCTGTCGAGG
ACCCACGTGG CGGACATCGA GCGCTGCTAC GAAGCGGTCC GCGATGCGGA GCACCACCGC
ATCCACGTCT TCATCTCGAC GTCGCCGAGT CACCTCGAGC ACATGTTGCG CATGAGCGAG
GATCAGGTGG TCGAGGCCGT GCGTCGCGCG ATCGCTCGCG CACGTGAGCT CGTCGACGAC
GTCGAGTTCT CTCCGCAGGA CGCAACGCGC ACGCCGCTGC CGTTCCTCTA CCGCGTGCTC
CAGGTCGCCG TCGACGAGGG CGCGAGCACG CTCAACATCC CCGACACCGT TGGCTACGGC
ATTCCCTGGG ATTTCGCGCG CATGGTCGAG TCGGTGCGCC GGGAGGTCGC CGGTTCCTAC
GTGATCTCGT GTCACTGTCA CAACGACCTT GGTCTCGCGA CGGCCAACTC CCTGGCCGCC
GTGGCCGCGG GTGCACGCCA GGTTGAGTGC TGCATCAACG GGATCGGGGA GCGTGCAGGG
AACGCCGCAC TCGAAGAGGT CGTGATGGGG CTTGCGATCC GTTCGGATGT GATCGGCGAC
GTCACAACCG GGATCGACAC GCGCGAGCTC GCGCGAACCT CTCGACTCGT CTCGCGGCTC
ACCGGCTATC CGGTGCAGTA CAACAAGGCG GTCGTTGGCC GGAATGCCTT CGCGCACGAG
TCGGGCATCC ATCAGCACGG TGTCCTCACC GATCGCTCCA CCTATGAGGT GATCGACGCT
GCCAGCGTCG GCCAGGAGGC AGCCCAAATC GTGCTCGGGA AGCATTCTGG TCGGCACGCC
TTCCAAGAAG CGTTGGCGCG CATGGGGATC GCGCTCGAGG GTGATGCGCT CAACGCGACC
TTCCAGCGCT TCAAGGAGCT CGCTGACCGC AAGGTCGAGT TGTCGGAGGC CGATCTCGAG
GCGATCGTTG CCGAAGAGCT CGGCACGACG CTCGCCGATC GGTTCGAGCT CGTGAGCTTT
CGGGTCGAGG CGGGAACGGG TCGCGAGGCC GTGGCGTCGG CCACCGTGCT CGTCGATGGG
ACCCCGGTCG AGGCCTCGGC CTCCGGCAAC GGCATGGTCG ACGCGCTCGG TCGGGTGCTC
GCCGAGGCGA CGGCCCTCGA GGCACGGCTC ACCGGCTTCT CGGTGACGTC GGTGACGGGC
GGGGCCGATG CGCTGGGATC GGTCGCGGTG ACCGTCGACG TCGGTGGGCA CGAGGTGAGT
GGGCGTGGCG TGTCGACGGA CATCGTCGAG GCCTCTGCGC GTGCGCTCTT GAATGCGCTC
AATCGAGCAG CGCGGGTGCG CGAGAAGGCA TCGAACCGCG AGACGCCCTG A
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| Protein sequence | MDEVGTQERI RIFDTTLRDG EQAPGISLDP LEKLEIAEQL ARLGVDIIEA GFPVASQGDF
DAVRQIARQV HGPVICGLSR THVADIERCY EAVRDAEHHR IHVFISTSPS HLEHMLRMSE
DQVVEAVRRA IARARELVDD VEFSPQDATR TPLPFLYRVL QVAVDEGAST LNIPDTVGYG
IPWDFARMVE SVRREVAGSY VISCHCHNDL GLATANSLAA VAAGARQVEC CINGIGERAG
NAALEEVVMG LAIRSDVIGD VTTGIDTREL ARTSRLVSRL TGYPVQYNKA VVGRNAFAHE
SGIHQHGVLT DRSTYEVIDA ASVGQEAAQI VLGKHSGRHA FQEALARMGI ALEGDALNAT
FQRFKELADR KVELSEADLE AIVAEELGTT LADRFELVSF RVEAGTGREA VASATVLVDG
TPVEASASGN GMVDALGRVL AEATALEARL TGFSVTSVTG GADALGSVAV TVDVGGHEVS
GRGVSTDIVE ASARALLNAL NRAARVREKA SNRETP
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