| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1516 |
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| Symbol | |
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| ID | 8323600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1580849 |
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| End bp | 1583011 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644952647 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003110112 |
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| Protein GI | 256372288 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGCG TCGGACTCGA GGATCTCGCA GCGACGGCGC TTGCGGACCT TGCGTGGCTG
TCACCGAAGG TCGTGAAGGG TCTCGAGGCG CTCGACGTCG TGACGGCCTA CGACCTTGTG
ACCTACTATC CCCGGCGCTA CGTCGATCGC ACCCGCCACG TCATGATCGC CGACGCGGTT
CCGGGCGAAG AGGTCGTGCT GATCGGACGC ATCGCCAGCG TCCGTGTCGT GCCGACGCGC
AAGCGCTCCA TGACGCTGGT GGAGGCGCGG CTGGTCGACG AGACGGGGTC GGTCGGGCTG
CGCTTCTTCC GCCAGCCGTG GCGTGCGAAG CAGCTCGGAC GGCTCCACGG CGACATCGCC
GTGTTCGGCA AGGTCGAACT CTTTCGCAAG GAGCGTCAGC TCGTCAACCC GCTCGTCGAC
CCCATCGGCG ACCGTACGGG TCGGATCGTG CCGCTCTATC CGCTGCGCGA CGGGGCCGGG
ATCGACTCTG GTGCCATCGC GAGTGCGGTT CTCGGACTCC TCGAGCGCTT CTCCCCGATC
GCGGAGACGA TCCCGAGGGC GGTGCGAGAT GCGCTGGGTC TGCTCGGGCG CGAGGAAGCG
CTCCGCGCCA TCCATGCGCC GGCCACGCTC GAGCAGCGAC TCGAAGCTCG ACGCCGCATC
GCCTTCGAGG AACTCTTTCG CATCCAGGTC ATGCTCGGTC TCGTACGACG GGAGCGCGAT
GCTCACCAGC GTGGCTTCGC CCACGACGTT GCTCCGTTCG GGCCTGGGAC CGGTCGGCGC
GTGGCAGAAC TGCTCGCCCG ACTCCCGTTC TCACTCACGG CTGCCCAGCG CCGAGTGGTC
ACCGATATCG CCGGTGACAT GCAGCGGGAC CGGCCCATGC ATCGGCTCCT CCAGGGCGAC
GTCGGAGCCG GCAAGACGCT CGTCGCGCTG ATTGCTGCGC TGTTCGCGAT CCAAGGCGGC
CATCAAGCCG CGTTGCTCGC GCCCACAGAG GTGCTCGCTG AACAGCACTT CCGCACGATC
CTGTCGCTGC TTGGCACTGC TCGTGAGGCT CGGGAGCGCA CACCGGGCCT CTTCGATGAC
GAGGTAGCGC CGATCGAGGT CGCCCTCCTC ACGGGGACTG TGGCCTCGAA GCGCCGAGCC
GACATCGTCG AGGGGTTGGC CCGCGGAACG ATCGATCTGG TCGTCGGGAC CCATGCCCTG
CTCACCGAGG GAGTCAACCT CGCTTCGCTT GGGCTCGTCG TGGTCGACGA GCAGCATCGC
TTCGGCGTGG AGCAGCGTTC GTTGTTGCGC GATCGTCATG CGGAGATCGC CGGGCGTGTG
GCGGACACGC TCGTCATGAC AGCCACACCG ATACCTCGAA CTGCGGCGAT GACGGTCTAC
GGCGATCTCG ACCTCTCCGT GATCGACGAA CTCCCACCGG GGCGGACGCC GATCCGCACG
AAGTGGCTGC GTGAACGGAG CGCCTACGTC GAGGCCTTCG ACTACCTGCG GGCAGAGGTC
GGCCGAGGTC GGCAGGGTTA CGTCGTCTGC GCTCTCGTCG AAGAGAGCGA ACGGCTCCAG
GCGCGCTCGG CCGAGGAAGA GTTCGCCAGG CTCGGCAACT CGGAGCTCGC CGGACTCCGG
CTCGGACTGC TCCATGGCCG CATGCCGGCG CGCGAGAAGG ACCGGCAGAT GGCGGCGTTT
CGAGCGGGCA TCATCGACGT GCTCGTCGCG ACGACCGTGA TCGAGGTCGG CGTGGACGTG
CCAAACGCGA CCGTGATGAT CATCGAAGAC GCCGACCGCT TCGGCATCGC CCAGCTGCAT
CAGCTGCGCG GTCGGGTGGG CCGTGGCGAG CACGCGTCGG CGTGCTTCCT TCTCGCCGAG
ACCGACCAGG GCCCGACGGC GGCGCGCCTG GAGGCTCTCG AACGTACGAC GGACGGCTTC
GAGCTCGCCG AGGTCGACCT CGTGCTGCGC GGCGAGGGCA CGGTCCTCGG TGCGCGTCAA
TCGGGCAGGA GCGACCTCAA GCTCGCCTCG GTCGTGCGCG ATCGCCCCTT GGTCGAGGCG
GCACGCCACC ACGCCACCCG ATTGCTCGAG GTCGACCCGA GCCTCCGCGA GCATCCGAGG
CTCGCGCGGG AACTCGCACT GGTCGCCGAC CCCGACCAGC TGGCATACCT GCTCCGGAGC
TAG
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| Protein sequence | MSGVGLEDLA ATALADLAWL SPKVVKGLEA LDVVTAYDLV TYYPRRYVDR TRHVMIADAV
PGEEVVLIGR IASVRVVPTR KRSMTLVEAR LVDETGSVGL RFFRQPWRAK QLGRLHGDIA
VFGKVELFRK ERQLVNPLVD PIGDRTGRIV PLYPLRDGAG IDSGAIASAV LGLLERFSPI
AETIPRAVRD ALGLLGREEA LRAIHAPATL EQRLEARRRI AFEELFRIQV MLGLVRRERD
AHQRGFAHDV APFGPGTGRR VAELLARLPF SLTAAQRRVV TDIAGDMQRD RPMHRLLQGD
VGAGKTLVAL IAALFAIQGG HQAALLAPTE VLAEQHFRTI LSLLGTAREA RERTPGLFDD
EVAPIEVALL TGTVASKRRA DIVEGLARGT IDLVVGTHAL LTEGVNLASL GLVVVDEQHR
FGVEQRSLLR DRHAEIAGRV ADTLVMTATP IPRTAAMTVY GDLDLSVIDE LPPGRTPIRT
KWLRERSAYV EAFDYLRAEV GRGRQGYVVC ALVEESERLQ ARSAEEEFAR LGNSELAGLR
LGLLHGRMPA REKDRQMAAF RAGIIDVLVA TTVIEVGVDV PNATVMIIED ADRFGIAQLH
QLRGRVGRGE HASACFLLAE TDQGPTAARL EALERTTDGF ELAEVDLVLR GEGTVLGARQ
SGRSDLKLAS VVRDRPLVEA ARHHATRLLE VDPSLREHPR LARELALVAD PDQLAYLLRS
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