| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1508 |
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| Symbol | |
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| ID | 8323592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1575655 |
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| End bp | 1576482 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644952639 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003110104 |
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| Protein GI | 256372280 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.599742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGAGG CGCCTGAGGT CGAGCGGGTG CGCGAGGTGC TGGCCGCACG TGTCGAGGGG
GCGACGCTCG AGGGGATCCG CATGGTTGGA CGGCGCCTCG TGCGCCGGCA CGACCCGGAG
CTCTTGGCGA CGGTGTCGGG GCGCCCGATC GTGTCGATGC GACGCATCGG CAAGTTCCTG
GTGTTCGATC TCGGCACCGA CGCGCTGGTC GTGCACCTCG GCATGGCTGG ACGTCTCGTC
GTCTCGGACG CCTCGGCGAC GGCGACCCAC GTCCAGCTCG TTCTCGACTT CCGTCGCGCC
GTCATCACAC TGGTCGATCC GCGCACGTTC TCCGAGGCCT TCGTTGACGT CCTCGGCACC
GACGGGCGGC CGCGTCGGCT CGCGGGGCTC GGTCCCGACG TGTTCGGTCC CGAGGAGGAG
ATCGCAGCGA GCCTCGAACG GCACGCTGCG AGGTCTCGGC GTGCGATCAA GACGGCGCTC
CTGGATCAGC GCGTGGTGGC GGGTCTTGGC AACATGTACG CTGACGAGAC CCTCTTTCGT
GTCGGTGTCC ATCCGAGCAC CCCGATGAAC GTGCTGGGGC GACGCCTCGT GGCGATCGCC
GAGGCTGCGG GCGATGTCGC CCGGGAGGCG CTCGCAGCGG GCGGTACGAC CTTCGCGGAT
CGGGCCTATC GCGACCCGCT CGATCGGCCT GGCGCCTTTG GCGCGCGCCT CGCCGTCTAC
CAACGTGCGG GCAGTCCGTG CCCCAGGTGC GCTACGTCGA TCGTCCGGAG GGTCTTGCAG
GGCCGATCAG CGCACTGGTG CCCGCGGTGC CAGCAGGGAG GGGGCTGA
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| Protein sequence | MPEAPEVERV REVLAARVEG ATLEGIRMVG RRLVRRHDPE LLATVSGRPI VSMRRIGKFL
VFDLGTDALV VHLGMAGRLV VSDASATATH VQLVLDFRRA VITLVDPRTF SEAFVDVLGT
DGRPRRLAGL GPDVFGPEEE IAASLERHAA RSRRAIKTAL LDQRVVAGLG NMYADETLFR
VGVHPSTPMN VLGRRLVAIA EAAGDVAREA LAAGGTTFAD RAYRDPLDRP GAFGARLAVY
QRAGSPCPRC ATSIVRRVLQ GRSAHWCPRC QQGGG
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